CB610696

Overview
NameCB610696
Unique NameCB610696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 3
Query:  186 APSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            APS    R+    A    D KE P ++VF  D+PGL+            +L ISGER +E+E++  K+ R+ER  GKF+R+F LP+N   + + A  ++GVLT+   K
Sbjct:   31 APSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQK 138          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.839e-14
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  201 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDN  V++V A   +GVLT+   K
Sbjct:   47 RDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEK 147          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 3
Query:  189 PSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++   +++ A  ++GVLT+   K
Sbjct:   37 PSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEK 143          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13
Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  201 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTI 491
            R+    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+N  +E + A  ++GVLT+
Sbjct:   35 RDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTV 131          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.656e-13
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 3
Query:  201 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            R+    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDN  V+++ A  ++GVLT+   K
Sbjct:   45 RDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEK 149          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  183 YAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQI--------------SGERSKEQEEKND--KWHRVERSSGK---FLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            + P +    +  A   +DW+ETP AHVF+ DLPGL           G IL++              +G+ S E+EE+ND  +WH  ER++G+    + +FRLP++   ++  A M +GVLT+  PK
Sbjct:   13 FFPGAGGVVAGEARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPK 138          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13
Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 3
Query:  105 RRTNVFDPVSLDVWDPFDGFLSSALTYAPSSARETSQFANAR--------IDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            RR     P     WDPF   +   + + P        FAN +         + +ET +A++FKADLPG+            R+  +SG+R +E+ E++++++  ER+ G F R F LP+    + V+A ++NGVLT+  PK
Sbjct:    7 RRGTGSTPQRTREWDPFQQ-MQELMNWDPFELANHPWFANRQGPPAFVPAFEVRETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLTLPK 145          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 7.727e-13
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  201 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            R+    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+N  VE + A  ++GVL +   K
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEK 150          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 3
Query:  210 SQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGER-----SKEQE-EKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            S  A A +DW ETP +HV + ++PGL           G +L + G        KE+E EK+  WH  ER   +F R   LP   +VEQ++A+++NGVLT+  PK
Sbjct:   25 SASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPK 128          
BLAST of CB610696 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.318e-12
Identity = 35/104 (33.65%), Postives = 58/104 (55.77%), Query Frame = 3
Query:  192 SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNGKVEQVKATMENGVLTIADPK 503
            S  R+    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+N   + + A  ++GVL++   K
Sbjct:   39 SYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQK 142          
The following BLAST results are available for this feature:
BLAST of CB610696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP21_SOLPE1.078e-1437.9617.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE1.839e-1440.5917.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_HELAN2.033e-1335.5117.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP21_PEA2.656e-1336.0817.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP18_ORYSJ2.656e-1338.1018.0 kDa class II heat shock protein OS=Oryza sati... [more]
HS178_ORYSJ3.468e-1334.1317.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]
SP21_STIAU4.530e-1331.21Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HSP22_IPONI7.727e-1335.9218.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP16_ORYSJ1.009e-1238.4616.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_SOYBN1.318e-1233.6517.9 kDa class II heat shock protein OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0003_IIIaF_B11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0003_IIIaF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610696 ID=CB610696; Name=CB610696; organism=Citrus sinensis; type=EST; length=504bp
GGGGATCTTCAAATTGATTGATCAAAGCATTTCCGAAGTTGTTGAGCATT
TAATTAGCGTCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTTCGG
TGGCCGAAGAACCAACGTGTTCGATCCAGTTTCATTAGATGTATGGGATC
CTTTCGACGGGTTCTTGTCCTCTGCCCTTACCTACGCGCCGTCTTCGGCT
AGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGACTCC
TCAGGCTCACGTATTCAAAGCTGATCTTCCAGGGCTGAGGAAAGAAGAAG
TAAAAGTTGAGGTTGTAGAGGGCAGGATTCTGCAGATAAGCGGAGAGAGG
AGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAGGAG
CAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGGTAAGGTGG
AACAGGTTAAGGCCACCATGGAGAATGGTGTGCTCACAATCGCCGATCCT
AAAC
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