CB610853

Overview
NameCB610853
Unique NameCB610853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 49/141 (34.75%), Postives = 84/141 (59.57%), Query Frame = 2
Query:  242 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            GNT FK+  +  A K+Y + ++Y++   +  +  ++ + + + ++C LN  ACKLK+ +++ A   C + L+LD  N KALYRRAQ +  + + D A  D+KKA  I P+++ ++ E   +K+K+K    KE   Y  MFA
Sbjct:  230 GNTFFKSQNWEMAIKKYAEVLRYVDSSKAVIETADRAKLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALELDPSNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMFA 370          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 8.867e-19
Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 2
Query:  242 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALK---VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            GNT FK+  +  A K+Y K ++Y+  D+S    EK     L+   ++C LN  ACKLK+ +++ A   C + L++D  N KALYR+AQ +  + + D A  D+KKA EI P ++ ++ E   +K+ +K    KE   Y  MFA
Sbjct:  230 GNTFFKSQNWEMAIKKYAKVLRYL--DSSKAVIEKADVSRLQPIALSCVLNIGACKLKMSNWQGAIDSCLEALEMDPSNTKALYRKAQGWQGLKEYDQALADLKKAQEIAPGDKAIQAELLKVKQMIKAQKDKEKAVYAKMFA 370          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP5_RHIOR (FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP5 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18
Identity = 60/184 (32.61%), Postives = 91/184 (49.46%), Query Frame = 2
Query:    5 VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 556
            VI+  + A+ TM+  E+A +    +Y +G    Q    +VPP + + +EVEL+ F ++ +S                 +GN LFK      A   Y K  +YI+       EE ++A+ L V+  LN  AC LKLK Y  A ++C K LD D   +KA YR  QAY++  D + +   I+  LE
Sbjct:   63 VIEAWELAIPTMQVGELAEIICTSDYGYGDQGRQY---IVPPRAQLRFEVELIGFWEKPKS----ASERIRLAEKKKNEGNALFKLDAIESALFAYRKGREYIQDLWDCEPEELEEARQLIVSIQLNIGACHLKLKHYDHAIEVCQKALDRDMTKIKAYYRIGQAYMEKGDYESSLTFIRIGLE 239          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP8_MOUSE (FK506-binding protein 8 OS=Mus musculus GN=Fkbp8 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.849e-16
Identity = 61/224 (27.23%), Postives = 103/224 (45.98%), Query Frame = 2
Query:    5 VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMS 670
            VI  LD +V  M   E A++T   +Y +G    Q     +PP++ +  EV L + E   +   ++              GN  ++   +  A+  Y+ A+K I  +T      EE+++   LKV C  N AA +LKL  Y+ A + C++VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y  M    S
Sbjct:  142 VIQALDLSVPLMDVGETAMVTADSKYCYGP---QGRSPYIPPHAALCLEVTLKTAEDGPDLEMLSGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSNTKVDMTCEEEEELLQLKVKCLNNLAASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKRAAQRSTETALYRKMLGNPS 362          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP8_RAT (FK506-binding protein 8 OS=Rattus norvegicus GN=Fkbp8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16
Identity = 60/224 (26.79%), Postives = 103/224 (45.98%), Query Frame = 2
Query:    5 VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMS 670
            VI  LD +V  M   E A++T   +Y +G   S+     +PP++ +  EV L + E   +   ++              GN  ++   +  A+  Y+ A+K I  +       EE+++   LKV C  N AA +LKL  Y+ A + C++VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y  M    S
Sbjct:  142 VIQALDLSVPLMHVGETAMVTADSKYCYGPQGSRSPY--IPPHAALCLEVTLKTAEDGPDLEMLSGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSNAKVDMTCEEEEELLQLKVKCLNNLAASQLKLDHYRAALRSCSQVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKRAAQRSTETALYRKMLGNPS 363          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP6_DICDI (FK506-binding protein 6 OS=Dictyostelium discoideum GN=fkbp6 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.379e-16
Identity = 57/212 (26.89%), Postives = 103/212 (48.58%), Query Frame = 2
Query:    5 VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYI---EYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL-DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNK 628
            VID ++ ++ TMK  + A +     YAFG          +PPN +V Y+++L+S++ +   +  N              GN  F+   Y ++ + Y K++  +   E      + E K  K   +   LN A+C +KLKD K+    C K+L+L  +   K  YR  QAY      D A+  + +A+ ++P+++ ++ E + +K+  +E NK
Sbjct:  159 VIDAIELSISTMKVGQEAEIVTTQRYAFGKLGLPP---FIPPNVSVIYKIKLLSYKLKSNDFT-NFESLINKSKEEKEIGNQFFQKSNYKKSIRHYVKSIWILNDPEQTLGLNEMENKLLKDTLIILYLNLASCNIKLKDGKRGISNCEKILELGGNTTAKFYYRMGQAYSLNKQYDSAKRCLVQAIRLEPNDKLLRDELENIKKLQEENNK 366          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP8_HUMAN (FK506-binding protein 8 OS=Homo sapiens GN=FKBP8 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 62/226 (27.43%), Postives = 101/226 (44.69%), Query Frame = 2
Query:    5 VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYI----EYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMS 670
            VI  LD +V  M   E A++T   +Y +G    Q     +PP++ +  EV L +     +   +               GN  ++   +  A+  Y+ A+K I    + D +F  EE+ Q   LKV C  N AA +LKL  Y+ A + C+ VL+    N+KAL+R+ +   Q  +   A   ++ AL+++P N+ +  E   L +K       E   Y  M    S
Sbjct:  152 VIQALDLSVPLMDVGETAMVTADSKYCYGP---QGRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVALANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTF--EEEAQLLQLKVKCLNNLAASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPSNKTIHAELSKLVKKHAAQRSTETALYRKMLGNPS 372          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP6_BOVIN (FK506-binding protein 6 OS=Bos taurus GN=FKBP6 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.554e-15
Identity = 61/227 (26.87%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   14 GLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQ-----------GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            G++  +++M++ E+A     P YA+G+        ++PPN+TV +E+EL+ F    ES                 +           GN LF+  ++  A  RY++A+  +   T+   EE+   +  K+   LN +   LKL+    A +   + L +D +N KAL+R  QA + M +   A   + +A    P N D+  E K L    ++Y  KE +    MFA
Sbjct:   93 GMELGLLSMRRGELARFLFKPTYAYGTLGCPP---LIPPNTTVLFEIELLDFLDSAESDKFCALSAEQQSQFPLQKVLKVAATEREFGNYLFRQNRFYDAKVRYKRALLLLHRRTA-PPEEQHLVETAKLLVFLNLSFTYLKLERPTMALRYGEQALIIDRKNAKALFRCGQACLLMTEYQKARDFLVRAQREQPFNHDINNELKKLASYYRDYMDKEREMCHRMFA 315          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.325e-14
Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = 2
Query:  242 GNTLFKAGKYARASKRYEKAVKYIE--YDTSFGDEEKKQA-KALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 658
            GN  FK   Y  A ++Y KA++Y++  ++    DEE   A +  K     N+AACKLK  D K A       +  +  NVKAL+R+ QAY+ + ++D A   ++KAL+ +P++  +K EY  + +K+   + +E K Y  MF
Sbjct:  219 GNEHFKKQDYKMALRKYRKALRYLDICWEKEGIDEETSTALRKTKSQIFTNSAACKLKFGDAKGALLDTEFAMRDEDNNVKALFRQGQAYMALNNVDAAAESLEKALQFEPNDAGIKKEYAAVMKKIAFRDNEEKKQYRKMF 360          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP6_MOUSE (FK506-binding protein 6 OS=Mus musculus GN=Fkbp6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14
Identity = 59/227 (25.99%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   14 GLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQ-----------GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            G++  +++M+K E+A     P YA+G+        ++PPN+TV +E+EL+ F    ES                 +           GN LF+  ++  A  RY++A+  +    +  +E+     A+ +   LN +   LKL     A +   + L +D RN KAL+R  QA + + + + A   + +A +  P N D+  E K L    ++Y  +E +    MFA
Sbjct:   94 GMELGLLSMRKGELARFLFKPAYAYGTLGCPP---LIPPNATVLFEIELIDFLDSAESDKFCALSAEQQEQFPLQKVLKVAATEREFGNYLFRQNRFCDAKVRYKRALLLLHRRLATCEEQHLVEPAVLLVL-LNLSFVYLKLDRPAMALRYGEQALLIDKRNAKALFRCGQACLLLTEYERARDFLVRAQKEQPCNHDINNELKKLSSHYRDYVDREREMCHRMFA 316          
The following BLAST results are available for this feature:
BLAST of CB610853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PPID_HUMAN3.047e-1934.7540 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_RAT8.867e-1937.0640 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
FKBP5_RHIOR3.369e-1832.61FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP8_MOUSE1.849e-1627.23FK506-binding protein 8 OS=Mus musculus GN=Fkbp8 P... [more]
FKBP8_RAT4.119e-1626.79FK506-binding protein 8 OS=Rattus norvegicus GN=Fk... [more]
FKBP6_DICDI5.379e-1626.89FK506-binding protein 6 OS=Dictyostelium discoideu... [more]
FKBP8_HUMAN4.554e-1527.43FK506-binding protein 8 OS=Homo sapiens GN=FKBP8 P... [more]
FKBP6_BOVIN4.554e-1526.87FK506-binding protein 6 OS=Bos taurus GN=FKBP6 PE=... [more]
CYP40_ARATH1.325e-1434.51Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
FKBP6_MOUSE2.260e-1425.99FK506-binding protein 6 OS=Mus musculus GN=Fkbp6 P... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIaF_H06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIaF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610853 ID=CB610853; Name=CB610853; organism=Citrus sinensis; type=EST; length=850bp
GGGAGTCATTGATGGGCTTGATAGAGCGGTGATTACAATGAAGAAAAATG
AGGTTGCACTGCTGACAATAGCACCAGAGTATGCTTTTGGCTCGGCTGAG
TCGCAGCAGGAGCTGGCTGTAGTACCTCCTAATTCAACTGTGCATTATGA
GGTTGAGCTGGTGTCCTTTGAAAAGGAGAAGGAATCGTGGGACATGAATA
CTGAGGAAAAGATTGAAGCCGCTGGGAAGAAGAAGGAACAAGGAAATACA
TTGTTTAAGGCAGGCAAATATGCAAGAGCCTCAAAGAGATATGAGAAAGC
TGTCAAGTACATCGAGTACGATACTTCCTTTGGTGACGAAGAGAAAAAAC
AGGCAAAGGCATTGAAAGTTGCTTGCAATCTCAATAATGCTGCTTGCAAA
TTGAAACTCAAGGATTACAAGCAGGCAGAAAAATTATGCACCAAGGTGCT
TGACTTGGATAGTAGAAATGTGAAAGCTCTGTACAGAAGGGCTCAGGCAT
ACATTCAGATGGCAGATTTAGATTTGGCAGAGTTTGATATCAAGAAAGCA
CTTGAGATTGATCCTGATAACAGGGATGTCAAGTTGGAGTACAAAACTTT
GAAGGAGAAGATGAAGGAATACAACAAAAAAGAGGCTAAGTTTTATGGCA
ACATGTTTGCGAAGATGAGTATGTTTGGATCTGCTGAATCCGATAAAGCA
GAGCCCAAGGAGGCAGAGCCCATGAGCGTAGACAGCAAGGCATGACTGAA
GTATAATCAATTTGATTTTTAGATATATATTAATTGCTGGTTTTTGTGTT
CCAATTCCATGGATTGTAGGACTTGTTGGGTCGTTTGCCTTACAGAATGA
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