CB610853

Overview
NameCB610853
Unique NameCB610853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBP6_HUMAN (FK506-binding protein 6 OS=Homo sapiens GN=FKBP6 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 63/227 (27.75%), Postives = 107/227 (47.14%), Query Frame = 2
Query:   14 GLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF----EKEK------ESWDMNTXXXXXXXXXXXXQ-GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            G++  +++M++ E+A     P YA+G+        ++PPN+TV +E+EL+ F    E +K      E  D               + GN LF+  ++  A  RY++A+  +    S   EE+   +A K+   LN +   LKL     A     + L +D +N KAL+R  QA + + +   A   + +A +  P N D+  E K L    ++Y  KE + +  MFA
Sbjct:   94 GMELGLLSMRRGELARFLFKPNYAYGTLGCPP---LIPPNTTVLFEIELLDFLDCAESDKFCALSAEQQDQFPLQKVLKVAATEREFGNYLFRQNRFYDAKVRYKRALLLLRR-RSAPPEEQHLVEAAKLPVLLNLSFTYLKLDRPTIALCYGEQALIIDQKNAKALFRCGQACLLLTEYQKARDFLVRAQKEQPFNHDINNELKKLASCYRDYVDKEKEMWHRMFA 316          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: TOM34_RAT (Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus GN=Tomm34 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.913e-13
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 2
Query:  239 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 571
            +GN L K G + +A ++Y +++ +                +L+ A   N A C L LK YK+AEK CT+ L LD +NVKA YRRAQAY  + D   +  DI   L+I+P N
Sbjct:  199 EGNELVKKGNHKKAIEKYSESLLF---------------SSLESATYSNRALCHLVLKQYKEAEKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLADISSLLQIEPRN 294          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBPL_RAT (FK506-binding protein-like OS=Rattus norvegicus GN=Fkbpl PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.499e-13
Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  122 VPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 589
            +P +ST   ++ L SF   ++SW++              +G  LF+AG    A++ Y +A++ +      G  E+    A       N AAC+L L   + A + C +VL+ +  ++KALYRR  A   + DLD A  D+KK L +DP NR  K E
Sbjct:  175 LPGSSTPLAKLRLDSFTNGRDSWELEAVEKEALAKEEHRRGTELFRAGNPQGAARCYGRALRLLLTLPPPGPPERTILHA-------NLAACQLLLGHPQLAAQSCDRVLEREPGHLKALYRRGVAQAALGDLDKATADLKKVLAVDPKNRAAKEE 323          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: UN45A_RAT (Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  239 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT----LKEKMKEYNKKEAK 640
            +GN LFK G Y  A   Y +A+       S G   + QA       + N AAC LKL+DY +AE   +K ++ D  +VKALYRR+QA  ++  LD A  D+K+ + ++P N+  +   +     ++EK++  +  +AK
Sbjct:   27 EGNELFKCGDYEGALTAYTQAL-------SLGATPQDQA-----ILHRNRAACHLKLEDYSKAESEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLKRCVSLEPKNKVFQESLRNIGGQIQEKVRYMSSTDAK 152          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: UN45A_MOUSE (Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.263e-13
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  239 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT----LKEKMKEYNKKEAK 640
            +GN LFK G Y  A   Y +A+       S G   + QA       + N AAC LKL+DY +AE   +K ++ D  +VKALYRR+QA  ++  LD A  D+K+ + ++P N+  +   +     ++EK++  +  +AK
Sbjct:   27 EGNELFKCGDYEGALTAYTQAL-------SLGATPQDQA-----ILHRNRAACHLKLEDYSKAESEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLKRCVSLEPKNKVFQESLRNIGGQIQEKVRYMSSTDAK 152          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.240e-12
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 2
Query:  242 GNTLFKAGKYARASKRYEKAVKYIE--YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 661
            G   FK   Y+ A ++Y K  K+++  +      E+ ++   LKV+  LN A C LKLKDYKQ     ++VL  ++ +     KALYRR  AY  + D D+A  D++ A    P++  +       K K K+ N+K  K    MF+
Sbjct:  226 GTEQFKKQNYSVALEKYVKCDKFLKEYFPEDLEKEQIEKINQLKVSIPLNIAICALKLKDYKQVLVASSEVLYAEAADEKAKAKALYRRGLAYYHVNDTDMALNDLEMATTFQPNDAAILKAIHNTKLKRKQQNEKAKKSLSKMFS 371          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: TANC2_MOUSE (Protein TANC2 OS=Mus musculus GN=Tanc2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 40/132 (30.30%), Postives = 78/132 (59.09%), Query Frame = 2
Query:  239 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 634
            +G+  +K GK   A++RY+ A+K    +  FG E+ K  + LKV+  LN + C+ K+ D+  AE+  TK L+L  ++ +A Y RA+A         A  D+K+A+++ P+NR+++     ++E+ ++  +++
Sbjct: 1250 EGDMFYKKGKVKEAAQRYQYALKKFPRE-GFG-EDLKTFRELKVSLLLNLSRCRRKMNDFGMAEEFATKALELKPKSYEAYYARARAKRSSRQFAAALEDLKEAIKLCPNNREIQRLLMRVEEECRQMQQQQ 1379          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBPL_MOUSE (FK506-binding protein-like OS=Mus musculus GN=Fkbpl PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 49/156 (31.41%), Postives = 76/156 (48.72%), Query Frame = 2
Query:  122 VPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 589
            +P +S    ++ L SF   ++SW+M              +G  LF+AG    A++ Y +A++ +      G  E+    A       N AAC+L L   + A + C +VL+ +  ++KALYRR  A   + DL+ A  D KK L +DP NR  K E
Sbjct:  175 LPGSSAPLAKLRLDSFTNGRDSWEMEAMEKEALAKEEHRRGTELFRAGNPQGAARCYGRALRLLLTLPPPGPPERTTLYA-------NLAACQLLLGHPQLAAQSCDRVLEREPGHLKALYRRGVARAALGDLEKATADFKKVLAVDPKNRAAKEE 323          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: FKBPL_HUMAN (FK506-binding protein-like OS=Homo sapiens GN=FKBPL PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.115e-12
Identity = 48/156 (30.77%), Postives = 78/156 (50.00%), Query Frame = 2
Query:  122 VPPNSTVHYEVELVSFEKEKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 589
            +P +S     + L SF + ++SW++ T            +G  LF+AG    A++ Y +A++ +      G  E+    A       N AAC+L L   + A + C +VL+ +  ++KALYRR  A   + +L+ A  D+KK L IDP NR  + E
Sbjct:  177 LPGHSGPPVRLTLASFTQGRDSWELETSEKEALAREERARGTELFRAGNPEGAARCYGRALRLLLTLPPPGPPERTVLHA-------NLAACQLLLGQPQLAAQSCDRVLEREPGHLKALYRRGVAQAALGNLEKATADLKKVLAIDPKNRAAQEE 325          
BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: TOM34_MOUSE (Mitochondrial import receptor subunit TOM34 OS=Mus musculus GN=Tomm34 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  239 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 571
            +GN L K G + +A ++Y +++                  +L+ A   N A C L LK YK+A K CT+ L LD +NVKA YRRAQAY  + D   +  DI   L+I+P N
Sbjct:  199 EGNDLVKKGNHKKAIEKYSESLL---------------CSSLESATYSNRALCHLVLKQYKEAVKDCTEALKLDGKNVKAFYRRAQAYKALKDYKSSLSDISSLLQIEPRN 294          
The following BLAST results are available for this feature:
BLAST of CB610853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
FKBP6_HUMAN2.952e-1427.75FK506-binding protein 6 OS=Homo sapiens GN=FKBP6 P... [more]
TOM34_RAT1.913e-1338.74Mitochondrial import receptor subunit TOM34 OS=Rat... [more]
FKBPL_RAT2.499e-1332.05FK506-binding protein-like OS=Rattus norvegicus GN... [more]
UN45A_RAT3.263e-1334.06Protein unc-45 homolog A OS=Rattus norvegicus GN=U... [more]
UN45A_MOUSE3.263e-1334.06Protein unc-45 homolog A OS=Mus musculus GN=Unc45a... [more]
PPID_YEAST1.240e-1232.88Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
TANC2_MOUSE2.115e-1230.30Protein TANC2 OS=Mus musculus GN=Tanc2 PE=1 SV=1[more]
FKBPL_MOUSE2.115e-1231.41FK506-binding protein-like OS=Mus musculus GN=Fkbp... [more]
FKBPL_HUMAN2.115e-1230.77FK506-binding protein-like OS=Homo sapiens GN=FKBP... [more]
TOM34_MOUSE2.763e-1237.84Mitochondrial import receptor subunit TOM34 OS=Mus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionALBEDO0002_IIaF_H06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIaF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610853 ID=CB610853; Name=CB610853; organism=Citrus sinensis; type=EST; length=850bp
GGGAGTCATTGATGGGCTTGATAGAGCGGTGATTACAATGAAGAAAAATG
AGGTTGCACTGCTGACAATAGCACCAGAGTATGCTTTTGGCTCGGCTGAG
TCGCAGCAGGAGCTGGCTGTAGTACCTCCTAATTCAACTGTGCATTATGA
GGTTGAGCTGGTGTCCTTTGAAAAGGAGAAGGAATCGTGGGACATGAATA
CTGAGGAAAAGATTGAAGCCGCTGGGAAGAAGAAGGAACAAGGAAATACA
TTGTTTAAGGCAGGCAAATATGCAAGAGCCTCAAAGAGATATGAGAAAGC
TGTCAAGTACATCGAGTACGATACTTCCTTTGGTGACGAAGAGAAAAAAC
AGGCAAAGGCATTGAAAGTTGCTTGCAATCTCAATAATGCTGCTTGCAAA
TTGAAACTCAAGGATTACAAGCAGGCAGAAAAATTATGCACCAAGGTGCT
TGACTTGGATAGTAGAAATGTGAAAGCTCTGTACAGAAGGGCTCAGGCAT
ACATTCAGATGGCAGATTTAGATTTGGCAGAGTTTGATATCAAGAAAGCA
CTTGAGATTGATCCTGATAACAGGGATGTCAAGTTGGAGTACAAAACTTT
GAAGGAGAAGATGAAGGAATACAACAAAAAAGAGGCTAAGTTTTATGGCA
ACATGTTTGCGAAGATGAGTATGTTTGGATCTGCTGAATCCGATAAAGCA
GAGCCCAAGGAGGCAGAGCCCATGAGCGTAGACAGCAAGGCATGACTGAA
GTATAATCAATTTGATTTTTAGATATATATTAATTGCTGGTTTTTGTGTT
CCAATTCCATGGATTGTAGGACTTGTTGGGTCGTTTGCCTTACAGAATGA
back to top