CB610853

Overview
NameCB610853
Unique NameCB610853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB610853 vs. ExPASy Swiss-Prot
Match: AIPL1_PAPCY (Aryl-hydrocarbon-interacting protein-like 1 OS=Papio cynocephalus GN=AIPL1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 51/191 (26.70%), Postives = 94/191 (49.21%), Query Frame = 2 
Query:  176 EKESWDMNTXXXXXXXXXXXXQGNTLFKAGKYARASKRYEKAVKYI-EYDTSFGDEEKKQAKALKV--ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD-NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMSMFGSAESDKAEPKEAEPMSVDS 736
            ++E+W+++             +GN LFK G+Y  AS +Y++A+  +    T     E +  K  K+     LN   C LK ++Y +  +  + +L      VKA Y RA+A+ ++ +   A+ D++K LE++P   + V+ E + L+ +M E  ++E     NM ++ +     E   AEP  A P  + +
Sbjct:  163 QRETWNLSNHEKMKVVPVLHGEGNRLFKLGRYEEASSKYQEAIICLRNLQTKEKPWEVQWLKLEKMINTLTLNYCQCLLKKEEYYEVLEHTSDILRHHPGIVKAYYVRARAHAEVWNEAEAKADLQKVLELEPSMQKAVRRELRLLENRMAEKQEEERLRCRNMLSQGATQPPTE-PPAEPHTAPPAELST 352
The following BLAST results are available for this feature:
BLAST of CB610853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
AIPL1_PAPCY8.887e-1126.70Aryl-hydrocarbon-interacting protein-like 1 OS=Pap... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIaF_H06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIaF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610853 ID=CB610853; Name=CB610853; organism=Citrus sinensis; type=EST; length=850bp
GGGAGTCATTGATGGGCTTGATAGAGCGGTGATTACAATGAAGAAAAATG
AGGTTGCACTGCTGACAATAGCACCAGAGTATGCTTTTGGCTCGGCTGAG
TCGCAGCAGGAGCTGGCTGTAGTACCTCCTAATTCAACTGTGCATTATGA
GGTTGAGCTGGTGTCCTTTGAAAAGGAGAAGGAATCGTGGGACATGAATA
CTGAGGAAAAGATTGAAGCCGCTGGGAAGAAGAAGGAACAAGGAAATACA
TTGTTTAAGGCAGGCAAATATGCAAGAGCCTCAAAGAGATATGAGAAAGC
TGTCAAGTACATCGAGTACGATACTTCCTTTGGTGACGAAGAGAAAAAAC
AGGCAAAGGCATTGAAAGTTGCTTGCAATCTCAATAATGCTGCTTGCAAA
TTGAAACTCAAGGATTACAAGCAGGCAGAAAAATTATGCACCAAGGTGCT
TGACTTGGATAGTAGAAATGTGAAAGCTCTGTACAGAAGGGCTCAGGCAT
ACATTCAGATGGCAGATTTAGATTTGGCAGAGTTTGATATCAAGAAAGCA
CTTGAGATTGATCCTGATAACAGGGATGTCAAGTTGGAGTACAAAACTTT
GAAGGAGAAGATGAAGGAATACAACAAAAAAGAGGCTAAGTTTTATGGCA
ACATGTTTGCGAAGATGAGTATGTTTGGATCTGCTGAATCCGATAAAGCA
GAGCCCAAGGAGGCAGAGCCCATGAGCGTAGACAGCAAGGCATGACTGAA
GTATAATCAATTTGATTTTTAGATATATATTAATTGCTGGTTTTTGTGTT
CCAATTCCATGGATTGTAGGACTTGTTGGGTCGTTTGCCTTACAGAATGA
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