CB610910
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 1.734e-96 Identity = 115/162 (70.99%), Postives = 131/162 (80.86%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFFSET AG+HVPRAVFVDLEPTVIDEVR G+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKL+D CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFSETGAGKHVPRAVFVDLEPTVIDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 1.734e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.551e-96 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKLSD CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 6.551e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.551e-96 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKLSD CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 6.551e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.551e-96 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKLSD CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 6.551e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.551e-96 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKLSD CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 6.551e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 6.551e-96 Identity = 114/162 (70.37%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRAVFVDLEPTVIDE+R G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEI+D LDR+RKLSD CTGLQGFLVF++ VDYG Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 124.405 bits (311), Expect = 6.551e-96 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 8.547e-96 Identity = 113/162 (69.75%), Postives = 134/162 (82.72%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE+ISIHIGQAG+Q+GN+CWELYCLEHGI PDG MPSD ++G D+F+TFFSET +GRHVPRAV +DLEPTVIDE+RTG+YR LFHPEQLI+GKEDAANN+ARGHYT+GKEI+DL LDR+R+L+DNCTGLQGFLVF++ VDYG Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGCDDSFSTFFSETGSGRHVPRAVMIDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 120.168 bits (300), Expect = 8.547e-96 Identity = 55/86 (63.95%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 K+KL F++YP+PQVSTAVVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+LDIERP+YTNLNR RFDGA+N Sbjct: 164 KAKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.171e-95 Identity = 113/162 (69.75%), Postives = 130/162 (80.25%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE ISIH+GQAG+Q+GN+CWELYCLEHGI P G MPSD +G D+FNTFFSET +G+HVPRAVFVDLEPTV+DE+RTG YRQLFHPEQLI+GKEDAANN+ARGHYT+GKE +DL LDRVRKLSD CTGLQGFL+F++ VDYG Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPSGQMPSDKAVGGKDDSFNTFFSETGSGKHVPRAVFVDLEPTVVDEIRTGLYRQLFHPEQLITGKEDAANNYARGHYTIGKEHIDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 120.553 bits (301), Expect = 7.171e-95 Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQV+TAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDIC+R+LDIERP+YTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 7.171e-95 Identity = 113/162 (69.75%), Postives = 133/162 (82.10%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYG 631 MRE ISIH+GQAG+Q+GN+ WELYCLEHGI PD MPSD T+GV+ D+FNTFFSET AG+HVPRAVFVDLEP+V+DEVR+G YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVD+ LDR+RKL+D CTGLQGFL+F++ VDYG Sbjct: 1 MRECISIHVGQAGVQMGNAVWELYCLEHGIQPDAKMPSDKTVGVSDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYG 162 HSP 2 Score: 120.939 bits (302), Expect = 7.171e-95 Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F +YP+PQV+TAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERP+YTNLNR RFDGA+N Sbjct: 164 KSKLEFAVYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALN 249
BLAST of CB610910 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 6.016e-94 Identity = 107/140 (76.43%), Postives = 123/140 (87.86%), Query Frame = 2 Query: 146 MREIISIHIGQAGIQVGNSCWELYCLEHGIHPDGMMPSDNTIGVAHDAFNTFFSETSAGRHVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLSDNCTGLQGFLVFNA 565 MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MPSD TIG D+F TFF ET AG+HVPRA+FVDLEPTVIDEVR G YRQLFHPEQLI+GKED ANN+ARGHYT+GKEI+D LDR+RKL+D CTGLQGFL F++ Sbjct: 1 MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGIYRQLFHPEQLITGKEDGANNYARGHYTIGKEIIDQVLDRIRKLADQCTGLQGFLCFHS 140 HSP 2 Score: 124.405 bits (311), Expect = 6.016e-94 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 1 Query: 631 KSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAIN 888 KSKL F+IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNR RFDGA+N Sbjct: 164 KSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249 The following BLAST results are available for this feature:
BLAST of CB610910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 416
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610910 ID=CB610910; Name=CB610910; organism=Citrus sinensis; type=EST; length=890bpback to top |