CB610962

Overview
NameCB610962
Unique NameCB610962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ALCFA (L-lactate dehydrogenase [cytochrome] OS=Alcaligenes faecalis GN=lldD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.222e-32
Identity = 90/274 (32.85%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP--PLKNLE---------------------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTL+ NV+    +  R R+L D+S++D S  +   K+S P+ ++P  L  +    GEV  ARAA +      +S                  ++QLYV K R      ++RA+  G   LV T D P  G R  D  + M  P   L+                        G +S  +   TG  ++        D S+SWKDLEW+R     P+LIKGIL  +DA  AV  G  GIIVSNHG RQLD
Sbjct:    8 DYRRAAQKRLPPFLFHYIDGGAYAEHTLRRNVDDLAEVALRQRVLKDMSQLDTSIDLFGEKLSMPVALSPVGLTGMYARRGEVQAARAADARGIPFTMSSVSVCPIEEVAPRLSRPMWFQLYVLKDRGFMRNALERAQAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAALRRYAQAVMHPRWAWDVGLLGRPHDLGNISRYLGKPTGLEDYMGYLGANFDPSISWKDLEWIREFWKGPMLIKGILDPDDARDAVRFGADGIIVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_SERP5 (L-lactate dehydrogenase [cytochrome] OS=Serratia proteamaculans (strain 568) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 89/274 (32.48%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTG---------------------SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTL+ N E    I  R RIL ++S + L T++   K++ P+I+ P  L  +    GEV  A+AAA       LS                  ++QLYV K R      ++RA+  G K LV T D P  G R  D  + M  P     + L+ +   + + D G                      ++        D S+SWKDL+W+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQAKLPPFLFHYIDGGAYAEHTLRRNTEDLAGIALRQRILRNMSDLSLETSLFGEKLAMPVILGPVGLTGMYARRGEVQAAKAAAQKGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVKTLVFTVDMPVPGARYRDAHSGMSGPNAAVRRMLQAVTHPQWAWDVGLCGKPHDLGNVSAYRGKPTSLEDYIGWLGTNFDPSISWKDLDWIREFWQGPMIIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIN (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 92/275 (33.45%), Postives = 124/275 (45.09%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPLKNLEGLLST--------------------KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV T D P  G R  D+ + M + P K +  +L                       VS+  G     D       E  D S+SWKDLEW+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGM-SGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 92/275 (33.45%), Postives = 124/275 (45.09%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPLKNLEGLLST--------------------KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV T D P  G R  D+ + M + P K +  +L                       VS+  G     D       E  D S+SWKDLEW+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGM-SGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 92/275 (33.45%), Postives = 124/275 (45.09%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPLKNLEGLLST--------------------KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV T D P  G R  D+ + M + P K +  +L                       VS+  G     D       E  D S+SWKDLEW+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGM-SGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 92/275 (33.45%), Postives = 124/275 (45.09%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPLKNLEGLLST--------------------KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++E AR  +P   + +  GG+  E TL  NV     I  R R+L D+S +D S  +   K+S P I+AP     +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   LV T D P  G R  D+ + M + P K +  +L                       VS+  G     D       E  D S+SWKDLEW+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYREAARRRVPPFMFHYADGGSYAEQTLARNVSDLENIALRQRVLKDMSELDTSIELFGEKLSMPTILAPVGACGMYARRGEVQAAQAADNKGVPFTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPTPGARYRDMHSGM-SGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 88/274 (32.12%), Postives = 127/274 (46.35%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +   + + D G N                     +        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 88/274 (32.12%), Postives = 127/274 (46.35%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +   + + D G N                     +        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 88/274 (32.12%), Postives = 127/274 (46.35%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +   + + D G N                     +        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ECO7I (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.202e-32
Identity = 88/274 (32.12%), Postives = 127/274 (46.35%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ + P  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P     + L+ +   + + D G N                     +        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
The following BLAST results are available for this feature:
BLAST of CB610962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ALCFA4.222e-3232.85L-lactate dehydrogenase [cytochrome] OS=Alcaligene... [more]
LLDD_SERP57.202e-3232.48L-lactate dehydrogenase [cytochrome] OS=Serratia p... [more]
LLDD_HAEIN7.202e-3233.45L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIG7.202e-3233.45L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE7.202e-3233.45L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI87.202e-3233.45L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_ECOL67.202e-3232.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL57.202e-3232.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO817.202e-3232.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO7I7.202e-3232.12L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIIaF_A09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIIaF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610962 ID=CB610962; Name=CB610962; organism=Citrus sinensis; type=EST; length=865bp
GGGGATTTCTTTACAAAATTCTATTGTTTAAGTTTGATTAATAGTTATTC
GAATCGGTTCCAAATGGCAGCTGAACCTGTTAATTTGGATGAGTTCCAAG
AATTGGCAAGGCTGGCCCTTCCAAAAATGTATTATGATTTCTACGCTGGT
GGAGCAGAAGATGAACATACCCTAAAAGAGAATGTGGAAGCCTTTCATAG
AATTACGTTTCGGTCAAGAATTCTTGTCGATGTCAGCAGAATTGATTTAT
CGACTACCATACTTGATTACAAAATCTCGGCTCCCATTATCATTGCTCCA
ACGGCTTTGCATAAGCTTGCAAACCCTGAAGGAGAGGTAGCCACAGCCAG
AGCAGCAGCTTCATGTAACACCATAATGGTTTTATCCTTCACATCTAGCA
GCTCCATAGAGGAGGTTGCGGCCAGCTCCAATGCTGTTCGCTTCTATCAA
TTATATGTATTCAAGAAACGAGATATAACAGCTACTCTAGTGCAGAGAGC
TGAAAGGAATGGTTTTAAGGCTCTTGTCCTAACTGCTGATACTCCAAGAC
TTGGTAGAAGGGAGGCAGATATAAAGAACAAAATGATTACACCGCCGTTG
AAGAATTTGGAAGGCCTCTTATCAACCAAAGTCAGCTCTGATACAGGTTC
GAATTTTGAAGCTGATGCCAACGAGACCATGGATGCTTCTTTAAGTTGGA
AGGATTTAGAATGGCTAAGATCTATTACAAACTTACCAATTTTGATCAAG
GGGATACTTACTCGTGAAGATGCAATAAAAGCTGTGGAAGTAGGTGTTGC
TGGGATTATTGTCTCCAATCACGGAGCTCGACAGTTAGATTATAGTCCTG
CCACTATTTCTGCTC
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