CB610962

Overview
NameCB610962
Unique NameCB610962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.963e-31
Identity = 90/274 (32.85%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP--PLKNLE---------------------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTLK NV     I  R R+L ++S + L T +    ++ P+ +AP  L  +    GEV  ARAA S      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P   L+ +                      G +ST   + TG  ++        D S+SWKDLEW+R     P++IKGIL  +DA  AV+ G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRRLPPFLFHYIDGGAYAEHTLKRNVSDLSDIALRQRVLRNMSDLSLETELFGETLAMPVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.963e-31
Identity = 86/274 (31.39%), Postives = 127/274 (46.35%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITPPL---KNLEGLLSTKVSSDTGSN---------------------FEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  E+TL+ NVE   ++  R R+L ++S + L TT+ +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P     +  + ++  K + D G N                     +        D S+SWKDLEW+R   + P++IKG+L  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGLLDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_XANAC (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas axonopodis pv. citri GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.040e-30
Identity = 90/274 (32.85%), Postives = 125/274 (45.62%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP--PLKNL---------------------EGLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A   LP   + +  GGA  EHTL+ NV     +  R R+L ++S + LST +    ++ P+ +AP  L  +    GEV  ARAAA+      LS                  ++QLYV K R      ++RA+  G   LV T D P  G R  D  + M  P   L+ +                      G +S    S TG  ++        D S++WKDLEW+R     P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADVALRQRVLRNMSDLRLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAVTHPRWAWDVGLLGKPHDLGNISAYRGSPTGLQDYIGWLGANFDPSIAWKDLEWIREFWTGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.040e-30
Identity = 91/274 (33.21%), Postives = 124/274 (45.26%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMITP--PLKNLE---------------------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A   LP   + +  GGA  EHTLK NV     I  R RIL ++S + L T +    ++ P+ +AP  L  +    GEV  ARAA S      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M  P   L+ +                      G +ST   + TG  ++        D S+SWKDLEW+R     P++IKGIL  +DA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAERRLPPFLFHYIDGGAYAEHTLKRNVSDLSDIALRQRILRNMSDLSLETELFGETLAMPVALAPVGLTGMYARRGEVQAARAADSRGIPFTLSTVSVCPIEEVAPAIQRPMWFQLYVLRDRGFMRNALERAQAAGVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ENT38 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sp. (strain 638) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.040e-30
Identity = 88/274 (32.12%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTL+ NVE    +  R R+L ++S + L T + +  +S P+ +AP  L  +    GEV  A AA +      LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYIDGGAYSEHTLRRNVEDLSEVALRQRVLKNMSDLSLETKLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADARGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGANAAMRRYWQAVTHPQWAWDVGVNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP7 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30
Identity = 90/274 (32.85%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_KLEP3 (L-lactate dehydrogenase [cytochrome] OS=Klebsiella pneumoniae (strain 342) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30
Identity = 90/274 (32.85%), Postives = 126/274 (45.99%), Query Frame = 1
Query:   91 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKM-------------ITPPLKNLE----------GLLSTKVSSDTG-SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            +++  A+  LP   + +  GGA  EHTL+ NVE    +  R RIL ++S + L TT+ + K++ P  +AP  L  +    GEV  A AA        LS                  ++QLYV + R      ++RA+  G   LV T D P  G R  D  + M             +T P    +          G +S  +   TG  ++        D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    8 DYRAAAQRILPPFLFHYIDGGAYAEHTLRRNVEDLSDVALRQRILRNMSDLSLETTLFNEKLAMPTALAPVGLCGMYARRGEVQAAGAADDKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGQPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.358e-30
Identity = 85/275 (30.91%), Postives = 128/275 (46.55%), Query Frame = 1
Query:   88 DEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKMIT---PPLKNLEGLLSTKVSSDTG---------------------SNFEADANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            ++++  A+  LP   + +  GGA  E+TL+ NVE    I  R ++L +V+ + L T +   K++ P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV K R      ++RA+  G   L+ T D P  G R  D  + M     P  + L+ ++  + + D G                     +++        D S+SWKDLEW+RS    P++IKGIL   DA  AV  G  GI+VSNHG RQLD
Sbjct:    7 NDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ACTPJ (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.774e-30
Identity = 90/275 (32.73%), Postives = 129/275 (46.91%), Query Frame = 1
Query:   88 DEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKM-------------ITPPL----KNLEGLLST--KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            ++++E AR  +P   + +  GG+  E TL+ NV     +  R R+L D+S++D    +   K++ P ++AP     +    GEV  A+AA +      LS                  ++QLYV K R     +++RA+  G   LV T D P  G R  D  + M             +T P       ++G   T   VS+ TG     D       E  D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    7 NDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGARYRDRHSGMSGDYKEIRRALQAVTHPFWAWDVGIKGKPHTLGNVSAYTGKAVGLDDYVVWLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
BLAST of CB610962 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP7 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.774e-30
Identity = 90/275 (32.73%), Postives = 129/275 (46.91%), Query Frame = 1
Query:   88 DEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADIKNKM-------------ITPPL----KNLEGLLST--KVSSDTGSNFEAD-----ANETMDASLSWKDLEWLRSITNLPILIKGILTREDAIKAVEVGVAGIIVSNHGARQLD 840
            ++++E AR  +P   + +  GG+  E TL+ NV     +  R R+L D+S++D    +   K++ P ++AP     +    GEV  A+AA +      LS                  ++QLYV K R     +++RA+  G   LV T D P  G R  D  + M             +T P       ++G   T   VS+ TG     D       E  D S+SWKDLEW+R   + P++IKGIL  EDA  AV  G  GI+VSNHG RQLD
Sbjct:    7 NDYREAARRRVPPFMFHYADGGSFSERTLERNVTDLADLALRQRVLKDMSQLDTEIELFGEKLAMPAVLAPVGACGMYARRGEVQAAQAAENKGIPFTLSTVSICPIEEVTAAIKRPMWFQLYVLKDRGFMKHVLERAKAAGCSTLVFTVDMPTPGARYRDRHSGMSGDYKEIRRALQAVTHPFWAWDVGIKGKPHTLGNVSAYTGKAVGLDDYVVWLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLD 281          
The following BLAST results are available for this feature:
BLAST of CB610962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_STRM57.963e-3132.85L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_SALPC7.963e-3131.39L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_XANAC1.040e-3032.85L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_STRMK1.040e-3033.21L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_ENT381.040e-3032.12L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_KLEP71.358e-3032.85L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_KLEP31.358e-3032.85L-lactate dehydrogenase [cytochrome] OS=Klebsiella... [more]
LLDD_AZOC51.358e-3030.91L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_ACTPJ1.774e-3032.73L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP71.774e-3032.73L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IIIaF_A09 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IIIaF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610962 ID=CB610962; Name=CB610962; organism=Citrus sinensis; type=EST; length=865bp
GGGGATTTCTTTACAAAATTCTATTGTTTAAGTTTGATTAATAGTTATTC
GAATCGGTTCCAAATGGCAGCTGAACCTGTTAATTTGGATGAGTTCCAAG
AATTGGCAAGGCTGGCCCTTCCAAAAATGTATTATGATTTCTACGCTGGT
GGAGCAGAAGATGAACATACCCTAAAAGAGAATGTGGAAGCCTTTCATAG
AATTACGTTTCGGTCAAGAATTCTTGTCGATGTCAGCAGAATTGATTTAT
CGACTACCATACTTGATTACAAAATCTCGGCTCCCATTATCATTGCTCCA
ACGGCTTTGCATAAGCTTGCAAACCCTGAAGGAGAGGTAGCCACAGCCAG
AGCAGCAGCTTCATGTAACACCATAATGGTTTTATCCTTCACATCTAGCA
GCTCCATAGAGGAGGTTGCGGCCAGCTCCAATGCTGTTCGCTTCTATCAA
TTATATGTATTCAAGAAACGAGATATAACAGCTACTCTAGTGCAGAGAGC
TGAAAGGAATGGTTTTAAGGCTCTTGTCCTAACTGCTGATACTCCAAGAC
TTGGTAGAAGGGAGGCAGATATAAAGAACAAAATGATTACACCGCCGTTG
AAGAATTTGGAAGGCCTCTTATCAACCAAAGTCAGCTCTGATACAGGTTC
GAATTTTGAAGCTGATGCCAACGAGACCATGGATGCTTCTTTAAGTTGGA
AGGATTTAGAATGGCTAAGATCTATTACAAACTTACCAATTTTGATCAAG
GGGATACTTACTCGTGAAGATGCAATAAAAGCTGTGGAAGTAGGTGTTGC
TGGGATTATTGTCTCCAATCACGGAGCTCGACAGTTAGATTATAGTCCTG
CCACTATTTCTGCTC
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