CB610968

Overview
NameCB610968
Unique NameCB610968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: MMSA_MOUSE (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:    3 EGGKILTGGSVIE----SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIP 287
            EG  IL  G  I+      GNFV PTI+  + P+    KEE+F PVL V++ +T +EA+KI N  P G  ++IFT +     K+   H  D G V VN+P
Sbjct:  377 EGASILLDGRRIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATARKY--AHMVDVGQVGVNVP 474          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVN 275
            EG K+  GGS +E +G F++PT+  E++    I KEE+F PV  ++KF++ EE +K  NS   GL++++FT++ +   K      S T  +N
Sbjct:  375 EGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWIN 466          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: MMSA_RAT (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:    3 EGGKILTGGSVIE----SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIP 287
            EG  IL  G  I+      GNFV PTI+  + P+    KEE+F PVL V++ +T +EA+KI N  P G  ++IFT +     K+   H  D G V VN+P
Sbjct:  377 EGASILLDGRKIKVKGYENGNFVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGAIARKY--AHMVDVGQVGVNVP 474          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 39/105 (37.14%), Postives = 64/105 (60.95%), Query Frame = 3
Query:    3 EGGKILTGGS-VIESE---GNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLRPHGSDTGIVNVNIPTNGAE 302
            EG K++ GG+  +E E   G FV+PTI E +     I +EE+F PVL +++  + EEA+K+ N    GLS+SI+T++  N  ++++    + G++ VN  T G E
Sbjct:  350 EGAKLIYGGNRCLEGELANGFFVEPTIFEDVDLQMTIAREEIFGPVLALIQVDSIEEAIKLANDTEYGLSASIYTKNIGNALEFIK--DIEAGLIKVNAETAGVE 452          
BLAST of CB610968 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 66.6254 bits (161), Expect = 7.935e-11
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 3
Query:    3 EGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 218
            EG KILTGG  +  +G F++PT+  +++    IVKEE+F PV+ V KF+T EE V++ NS   GL S I T S
Sbjct:  368 EGAKILTGGEKVGDKGYFIRPTVFYDVNEDMRIVKEEIFGPVVTVAKFKTLEEGVEMANSSEFGLGSGIETES 440          
The following BLAST results are available for this feature:
BLAST of CB610968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
MMSA_MOUSE4.652e-1141.00Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
AL1A3_HUMAN4.652e-1136.96Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
MMSA_RAT7.935e-1141.00Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
ALDH_BACST7.935e-1137.14Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
ALDH6_YEAST7.935e-1147.95Magnesium-activated aldehyde dehydrogenase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_G11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610968 ID=CB610968; Name=CB610968; organism=Citrus sinensis; type=EST; length=524bp
GGGAGGGAGGGAAGATCCTTACAGGTGGTTCTGTTATAGAGTCTGAGGGG
AACTTTGTGCAGCCCACAATAGTTGAGATTAGTCCAACAGCTGACATTGT
TAAAGAAGAGTTGTTTGCTCCTGTCCTTTATGTTATGAAATTTCAGACCT
TCGAAGAAGCAGTTAAGATCAATAATTCAGTACCCCAGGGATTGAGTAGT
TCTATTTTCACCCGCAGTCCTGAAAATATTTTCAAGTGGCTAAGGCCACA
TGGAAGTGACACTGGTATTGTGAATGTAAATATACCTACAAATGGGGCTG
AAATTGGTGGTGCTTTTGGTGGTGAAAAGGCTACAGGGGGAGGCCGTGAA
GCAGGAAGTGATTCTTGGAAGCAATACATGCGACGCTCGACTTGCACAAT
CAACTATGGAAATGAATTGCCTCTGGCCCAAGGAATCAATTTCGGCTAAG
TGGAGCACATTTTGGTCAAGTATGTTAACATATTCTGGTTTGACTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
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