CB610969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_CANTR (60S ribosomal protein L44 OS=Candida tropicalis GN=RPL44 PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.394e-39 Identity = 76/104 (73.08%), Postives = 86/104 (82.69%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKETSL 380 MVN+PKT+ TY K K CRKHT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFHKKAKTTKKIVL+L+C CK Q P+KRCKH E+GG+KK K +L Sbjct: 1 MVNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQAL 104
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_CAEEL (60S ribosomal protein L44 OS=Caenorhabditis elegans GN=rpl-41 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.485e-38 Identity = 73/100 (73.00%), Postives = 84/100 (84.00%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPK ++T+ K CRKHT HKVTQYKKGK+S AQG+RRYDRKQSG+GGQTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK + Sbjct: 1 MVNVPKARRTFCDGK-CRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSR 99
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_CHLRE (60S ribosomal protein L44 OS=Chlamydomonas reinhardtii GN=RPL44 PE=3 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 75/98 (76.53%), Postives = 81/98 (82.65%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 362 MVNVPKTK+ + K C+KH + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLR+QCQ CK +KRCKHFEIGGDKK Sbjct: 1 MVNVPKTKRAFCKG--CKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKK 96
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_BRUMA (60S ribosomal protein L44 OS=Brugia malayi GN=rpl-44 PE=3 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37 Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 362 MVNVPKT++T+ K CR+HT+HKVTQYKKGK+S AQG+RRYD KQ G+GGQTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK Sbjct: 1 MVNVPKTRRTFCDGK-CRRHTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKK 97
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_TAKRU (60S ribosomal protein L36a OS=Takifugu rubripes GN=rpl36a PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.797e-37 Identity = 76/102 (74.51%), Postives = 84/102 (82.35%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++TY K+C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTY--CKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_ICTPU (60S ribosomal protein L36a OS=Ictalurus punctatus GN=rpl36a PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.797e-37 Identity = 76/102 (74.51%), Postives = 84/102 (82.35%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++TY K+C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTY--CKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_DANRE (60S ribosomal protein L36a OS=Danio rerio GN=rpl36a PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.797e-37 Identity = 76/102 (74.51%), Postives = 84/102 (82.35%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++TY K+C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTY--CKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_RAT (60S ribosomal protein L36a OS=Rattus norvegicus GN=Rpl36a PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36 Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++T+ K+C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_PIG (60S ribosomal protein L36a OS=Sus scrofa GN=RPL36A PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36 Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++T+ K+C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_MOUSE (60S ribosomal protein L36a OS=Mus musculus GN=Rpl36a PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36 Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 3 Query: 69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368 MVNVPKT++T+ K+C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK K Sbjct: 1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100 The following BLAST results are available for this feature:
BLAST of CB610969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610969 ID=CB610969; Name=CB610969; organism=Citrus sinensis; type=EST; length=595bpback to top |