CB610969

Overview
NameCB610969
Unique NameCB610969
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_HUMAN (60S ribosomal protein L36a OS=Homo sapiens GN=RPL36A PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36
Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPKT++T+   K+C KH  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C    C+      IKRCKHFE+GGDKK K
Sbjct:    1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_BOVIN (60S ribosomal protein L36a OS=Bos taurus GN=RPL36A PE=3 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36
Identity = 75/102 (73.53%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPKT++T+   K+C KH  HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C    C+      IKRCKHFE+GGDKK K
Sbjct:    1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_AEDTR (60S ribosomal protein L44 OS=Aedes triseriatus GN=RpL44 PE=3 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 7.160e-36
Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPK ++TY   K+C+ H +HKVTQYKK K+  A+QG+RRYDRKQ G+GGQTKP+F KKAKTTKKIVLR++C  CK+  Q P+KRCKHFE+GGDKK K
Sbjct:    1 MVNVPKQRRTY--CKKCKVHRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAKTTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRK 98          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36L_HUMAN (60S ribosomal protein L36a-like OS=Homo sapiens GN=RPL36AL PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 7.160e-36
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPKT++T+   K+C KH  HKVTQYKKGKDSL AQG+RRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C    C+      IKRCKHFE+GGDKK K
Sbjct:    1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36L_PONAB (60S ribosomal protein L36a-like OS=Pongo abelii GN=RPL36AL PE=3 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.083e-35
Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPKT++T+   K+C KH  HKVTQYKKGKDSL AQG+RRYDRK+SGYGGQTKP+F KKAKTTKKIVLRL+C    C+      IKRCKHFE+GGDKK K
Sbjct:    1 MVNVPKTRRTF--CKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRK 100          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_DICDI (60S ribosomal protein L36a OS=Dictyostelium discoideum GN=rpl36a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.350e-34
Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKETSL 380
            MVN+PK +KT+    +C KHT HKVTQYK GK SL AQGKRRYDRKQSG+GGQTKPVFHKKAKTTKKIVLR++C  C +  Q  +KRCK FE+GG+KK K  ++
Sbjct:    1 MVNIPKARKTH--CVKCNKHTPHKVTQYKAGKPSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKIVLRMEC-SCGYKKQQVLKRCKRFELGGEKKSKNEAI 101          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_PLAF7 (60S ribosomal protein L44 OS=Plasmodium falciparum (isolate 3D7) GN=RPL44 PE=3 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.950e-33
Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKETSLF 383
            MVNVPKT+KTY  +K C+KHT+HKV+QYKKGK+ L++ G+RRYD KQ G+GGQTKPVF KKAKTTKKIVL+L+C  CK      +KRCK FE+G DKK K  +++
Sbjct:    1 MVNVPKTRKTYCSNK-CKKHTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKAKTTKKIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKKGGAVY 104          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL36A_PAPAN (60S ribosomal protein L36a OS=Papio anubis GN=RPL36A PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.803e-32
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGK 368
            MVNVPKT++T+ K  +  KH  HKVTQYKKGKDSL A GKRRYDRKQSGYGG TKP+F KKAKTTKKIVLRL+C    C+       KRCKHFE+GGDK  K
Sbjct:    1 MVNVPKTRQTFCKKYD--KHQPHKVTQYKKGKDSLYALGKRRYDRKQSGYGGHTKPIFWKKAKTTKKIVLRLECVEPNCRSERMLATKRCKHFELGGDKTRK 100          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_TRYBB (60S ribosomal protein L44 OS=Trypanosoma brucei brucei GN=RPL44 PE=3 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 5.310e-31
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 362
            MVN PK KK +   + C  H   KV QYK GK  L A+GKRRYDRKQSGYGGQTKP+FHKKAKTTKKIVL+LQC  CK + Q+ +KR KHFE+   KK
Sbjct:    1 MVNYPKKKKMHCPDERCNAHKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKKAKTTKKIVLKLQCSNCKSIIQNVLKRTKHFELNDKKK 98          
BLAST of CB610969 vs. ExPASy Swiss-Prot
Match: RL44_ENCCU (60S ribosomal protein L44 OS=Encephalitozoon cuniculi GN=RPL44 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.652e-27
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 3
Query:   69 MVNVPKTKKTYRKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKETSL 380
            MVN+PKT+ T+   K+C+ ++ HKV+Q KK KD+  AQG RRY RKQ GYGGQTKP+  +KAK TKK+VL L+C  CK   Q P+KR KH   GG++K K  +L
Sbjct:    1 MVNIPKTRNTF--CKKCKGYSAHKVSQAKKSKDNPRAQGNRRYARKQRGYGGQTKPILRRKAKVTKKLVLNLECTKCKFSHQKPLKRAKHVIFGGERKRKGEAL 102          
The following BLAST results are available for this feature:
BLAST of CB610969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RL36A_HUMAN3.214e-3673.5360S ribosomal protein L36a OS=Homo sapiens GN=RPL3... [more]
RL36A_BOVIN3.214e-3673.5360S ribosomal protein L36a OS=Bos taurus GN=RPL36A... [more]
RL44_AEDTR7.160e-3668.0060S ribosomal protein L44 OS=Aedes triseriatus GN=... [more]
RL36L_HUMAN7.160e-3672.5560S ribosomal protein L36a-like OS=Homo sapiens GN... [more]
RL36L_PONAB2.083e-3571.5760S ribosomal protein L36a-like OS=Pongo abelii GN... [more]
RL36A_DICDI1.350e-3467.3160S ribosomal protein L36a OS=Dictyostelium discoi... [more]
RL44_PLAF71.950e-3363.8160S ribosomal protein L44 OS=Plasmodium falciparum... [more]
RL36A_PAPAN4.803e-3268.6360S ribosomal protein L36a OS=Papio anubis GN=RPL3... [more]
RL44_TRYBB5.310e-3164.2960S ribosomal protein L44 OS=Trypanosoma brucei br... [more]
RL44_ENCCU4.652e-2754.8160S ribosomal protein L44 OS=Encephalitozoon cunic... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_H01 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610969 ID=CB610969; Name=CB610969; organism=Citrus sinensis; type=EST; length=595bp
GGGGGTTACCCTTCGGCAGCAGTTGGAAGTTACGAAGAGCTCTCTCGTCG
TCGCCGCAGCCGGCCATCATGGTGAATGTTCCCAAGACTAAGAAGACTTA
CCGCAAGAGCAAGGAGTGCAGAAAGCACACCTTGCACAAGGTGACACAGT
ACAAGAAGGGCAAGGACAGTCTTGCTGCTCAAGGGAAGAGACGGTATGAT
CGCAAGCAGTCTGGCTATGGCGGTCAGACCAAGCCTGTCTTCCACAAGAA
GGCTAAGACCACCAAGAAGATTGTGCTGAGGCTCCAATGCCAGGGTTGCA
AGCATGTGTCTCAACATCCCATCAAGAGGTGCAAGCACTTTGAAATTGGT
GGAGACAAGAAGGGAAAGGAAACATCTCTTTTCTAAATGCCTTTATTTTT
GTTTTTATGCTTTTTACTTTGCTGCACTTGATGGAACATTGCCCAGTATG
AGAATATTTGTTTTAGTTTTGTTGGGTTAGTTTGATGCTGTTAATTTAAA
ACTTGAAGCGGTTGTTTGTTAAGTGCTTATTATATCAGTTAATTTTATAT
TTGGATTTTTTTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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