CB610981

Overview
NameCB610981
Unique NameCB610981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33
Identity = 82/217 (37.79%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            + YDR +  FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T  L +  S+ KIV +D HI  A +GL ADA+ LI++AR+E Q+H  T  + +TVE +T+ ++ L  ++ +         RPFG++ L  G D     P L+  DPSGTF    A A G  S   +  L E   K  + +E IK ++  L +V+E      NI++A +
Sbjct:    6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATV 220          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.011e-33
Identity = 80/217 (36.87%), Postives = 122/217 (56.22%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            + YDR +  FSP+G LFQVEYA+EA++ G+ A+G+   + + L VEK+ T  L    +V KIV +D HI  A +GL ADAR LI RAR+ECQ+H     + +++E   + ++ L  ++  SG         RPFG++ L  G +   G P L+  DPSGTF    A A G  S   ++ L+   + + +  E I +++  L +V+E    +  V VM
Sbjct:    6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVM 220          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32
Identity = 82/217 (37.79%), Postives = 126/217 (58.06%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG-----VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFL-EKNCKETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            + YDR +  FSP+G LFQVEYA+E  + G+ A+G++ ++ + L VEK+ T  L +  S+ KIV +D HI  A +GL ADA+ LI++AR+E Q+H  T  + +TVE +T+ ++ L  ++ +         RPFG++ L  G D     P L+  DPSGTF    A A G  S   +  L E   K T+ +E IK ++  L +V+E      NI++A +
Sbjct:    6 SEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKG--PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATV 220          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 82/210 (39.05%), Postives = 121/210 (57.62%), Query Frame = 3
Query:   66 DMARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKN-CKETSGQETIKLAIRALL---EVVESGGKNI 683
            D   YDR  ++FSPDG ++QVEYA EAV++G   +GVR  D + L   + +  +L ++ S+ K+  LD+ +  A AG  ADAR L++ AR   Q   L   +P+ VE +T+ I    Q+ TQSGG RP+G S LI G +   G   L+ TDPSGT   WKA A G +   ++  LE    ++ S ++ + LA+ AL+   E +ES   N+
Sbjct:    5 DKQAYDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVE--NGSGRLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEALVAADEEIESDELNL 212          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.896e-32
Identity = 80/210 (38.10%), Postives = 118/210 (56.19%), Query Frame = 3
Query:   78 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKET---SGQETIKLAIRALLEVVESGGKNIKVAV 695
            YDR IT+FSP+G LFQVEYA +AV+  G  ++GVRG D++ +  +KK   KL D  SV  +  +  ++ L   G+ ADAR L+ +AR E    R      + V+ ++++IA   Q YTQ   +RP G+  +I+G D   G P L++ DP+G F   KA + G        FLEK  K     S +ET++ AI AL  V++   K  ++ V
Sbjct:    9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKG-PQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEV 217          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 79/210 (37.62%), Postives = 117/210 (55.71%), Query Frame = 3
Query:   78 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG---QETIKLAIRALLEVVESGGKNIKVAV 695
            Y+R IT+FSP+G LFQVEYA +AV+  G  ++GVRG D+I +   KK   KL D+ SV  +  +  ++ L   G+ ADAR L+ +AR E    R T    + V+ + ++IA   Q YTQ   +RP G+  +++G D   G P LY+ DP+G +   KA + G        FLEK  K       +ET++ AI AL  V++   K  ++ V
Sbjct:    9 YNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYG-PQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEV 217          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 76/205 (37.07%), Postives = 118/205 (57.56%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGG------VRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNS-NSMREFLEKNCKETSGQETIKLAIRALLEVVE 665
            + YDR ++ FSP+G LFQVEY+LEA++ G+ A+G+   + + LGVEK++T  L +S S+ KIV +D HI  A +GL ADAR +I  AR    +H L  ++ + VE +T+ +  L  ++ +          RPFG++ LI G D   G   L+  +PSGTF  + A A G  S  +  E L +     + +E   L ++ L +V+E
Sbjct:    6 SEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGY-QLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVME 209          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 79/212 (37.26%), Postives = 126/212 (59.43%), Query Frame = 3
Query:   75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRAR-IECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            RY  ++T FSP G L Q++YAL AV++G  ++G++ T+ + +  EKKS+  L  S ++ K+  L   I    +G+  D RVL++++R +   S++    +    + +   +A + Q+ TQSGGVRPFG+S LI G D + G  SLYQ DPSG++  WKA A G+ S + + FLEK    E   ++ I +A+  L E VE    G  I++A++
Sbjct:    4 RYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGF-SLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELAII 214          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.481e-31
Identity = 79/212 (37.26%), Postives = 116/212 (54.72%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG---QETIKLAIRALLEVVESGGKNIKVAV 695
            A YDR IT+FSP+G LFQVEYA +AV+  G  ++GVRG D++ +  +KK   KL D  SV  +  +  ++ L   G+ AD+R L+ +AR E    R      +  + + ++IA   Q YTQ   +RP G+  +++G D   G P LY+ DP+G F   KA + G        FLEK  KE       ET++ AI AL  V++   K  ++ V
Sbjct:    7 AGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERG-PLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEV 217          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.298e-31
Identity = 77/216 (35.65%), Postives = 127/216 (58.80%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKY----TQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKET-SGQETIKLAIRALLEVVES--GGKNIKVAVM 698
            + YDR +  FSP+G LFQVEYA+EAV+ G+ ++G++ ++ + L  EK+ST KL  + ++ KI  +D HI +  AGL AD+R L+ RA+IE Q+   T    + VE +T+ +A L  ++     ++   RPFG++ L  G D       L+  DPSGTF   KA + G  S+   + L++   +  + +E +K+A+  L +V+E      N++V V+
Sbjct:    6 SEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGA--KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVI 219          
The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSA5_BOVIN4.603e-3337.79Proteasome subunit alpha type-5 OS=Bos taurus GN=P... [more]
PSA5_DROME6.011e-3336.87Proteasome subunit alpha type-5 OS=Drosophila mela... [more]
PSA5_RAT1.339e-3237.79Proteasome subunit alpha type-5 OS=Rattus norvegic... [more]
PSMA2_HALVO3.896e-3239.05Proteasome subunit alpha 2 OS=Halobacterium volcan... [more]
PSA6_TOBAC3.896e-3238.10Proteasome subunit alpha type-6 OS=Nicotiana tabac... [more]
PSA6_SOYBN8.680e-3237.62Proteasome subunit alpha type-6 OS=Glycine max GN=... [more]
PSA5_YEAST8.680e-3237.07Proteasome component PUP2 OS=Saccharomyces cerevis... [more]
PSA2_YEAST8.680e-3237.26Proteasome component Y7 OS=Saccharomyces cerevisia... [more]
PSA6B_ARATH1.481e-3137.26Proteasome subunit alpha type-6-B OS=Arabidopsis t... [more]
PSA5_CAEEL3.298e-3135.65Proteasome subunit alpha type-5 OS=Caenorhabditis ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_F06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bp
GGGGAAAGAAACTCGAATCAGAGAGACGCAGAAATCGATCGAGAAGAGGA
AAATTAGAGAGATTTGACATGGCGAGATACGATCGAGCAATCACTGTATT
TTCACCGGATGGCCACCTGTTCCAAGTGGAATACGCACTAGAGGCCGTAC
GCAAAGGCAACGCCGCCGTCGGCGTGCGCGGCACCGACACCATCGCTCTT
GGCGTCGAAAAGAAATCCACTGTCAAGCTTCAGGACTCCAGATCAGTGAG
GAAGATTGTCAGCTTGGATAATCATATTGCATTGGCCTGTGCTGGACTTA
AAGCAGATGCTCGTGTACTGATAAACAGGGCTCGAATAGAATGTCAGAGC
CACAGGCTGACTGTTGAGGACCCAGTAACTGTTGAGTACATCACTCGTTA
CATTGCAGGTCTCCAGCAGAAGTACACACAAAGCGGTGGTGTGAGACCAT
TTGGTCTTTCTACTCTGATTGTGGGCTTTGATCCATACACTGGCGTGCCA
TCACTATATCAGACAGATCCTTCTGGGACATTTTCTGCTTGGAAAGCTAA
TGCAACTGGGAGAAACTCTAATTCAATGAGGGAGTTTCTGGAGAAAAACT
GTAAGGAAACTTCCGGGCAAGAAACTATAAAGCTTGCAATTCGGGCATTA
CTTGAGGTTGTTGAGAGTGGGGGCAAAAACATAAAAGTTGCTGTGATGAT
CN
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