CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 63/193 (32.64%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQETIKLAIRALL 653 +YD +TV+SP G L QVEYA+EA+++G+A VG++ + K++ L + +K+ +D H ++ AGL +D R+L + EC S R + V ++ + + Q TQ G RPFG+ LI G+D + QTDPS + + G S S R +LE+N +L + ALL Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ--KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYD--KDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALL 193
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21 Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 3 Query: 99 FSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK-NCKETSGQETIKLAIRAL 650 FSPDG LFQ EYA +AV + +G++ D + L +EK T KL R +I S+D HI +A G D + ++ RAR E S R P+ I + Q +T VRPFG+ + + +D + P LY +P+G + + A G+ R LEK N ++ +K A R L Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYD--SEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARIL 196
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16 Identity = 58/206 (28.16%), Postives = 104/206 (50.49%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEK-NCKETSGQETIKLAIRALLEV-VESGGKNIKV 689 YD A + FSPDG +FQVEYA +AV + +RG + + + +K + KL + ++ ++++++ +A AG D L N A E +P+ ++ I +A +T G RPFG + ++ TG L+ +PSG +KA A G++ + + +EK +E + +K A R ++ V E+ KN+++ Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTG-GRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEAARIIMVVRDENKDKNVQI 211
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 58/203 (28.57%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPY----TGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKET-----SGQETIKLAIRAL 650 A +D+ ITVFSP+G L+QVEYA +AV G V +R D + + + KL ++ + +++++ + G D + L+ +AR E ++ P+ V + + + Q TQ G+R G VG + +P +Y DP+G +A A A G+ FLEK K S +E +A+ AL Sbjct: 4 AGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAAL 205
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.652e-15 Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 99 FSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIAL-GVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQS--HRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE 608 F+ +G L QVE+A++ V + +G +D + L GV K+ T + + KI L + I GL DA L ARI+ Q R VE P+T + +++ +Q +TQ G RPFG+S L G G +L TDPSGT + WK G N ++ L+ + E Sbjct: 11 FTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPT-----NGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTT--LCKFVGQRKQAFTQYAGTRPFGVSFLYAGV--IDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPE 174 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |