CB610981

Overview
NameCB610981
Unique NameCB610981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 8.858e-77
Identity = 147/210 (70.00%), Postives = 173/210 (82.38%), Query Frame = 3
Query:   78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQE---TIKLAIRALLEVVESGGKNIKVAVM 698
            YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D + LGVEKKS  KLQD R+VRKI +LD+++ +A AGL ADAR++INRAR+ECQSHRLTVEDPVTVEYITRYIA L+Q+YTQS   RPFG+S LIVGFD + G P LYQTDPSGT+ AWKANA GR + S+R   EKN  + + +    TIKL I+ALLEVV+SGGKNI++AVM
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFD-FDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.580e-72
Identity = 127/215 (59.07%), Postives = 173/215 (80.47%), Query Frame = 3
Query:   69 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSR-SVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE----TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            M+ YDRA+++FSPDGH+FQVEYALEAV++G  AVGV+G + + LG E++ST+KLQD+R +  K+  +D+H+ L+ +GL AD+R+LI +AR+E QSHRLT+EDPVTVEY+TRY+AG+QQ+YTQSGGVRPFG+STLI GFDP    P LYQT+PSG +S+W A   GRNS ++REFLEKN        + +E +KL +R+LLEVV++G KNI++ V+
Sbjct:    1 MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVV 215          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 9.486e-71
Identity = 135/212 (63.68%), Postives = 167/212 (78.77%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE---TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            +RYDRA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + + LGVEKKS  +LQ+ R VRKI  LDNH+ +A AGL ADAR++INRA++ECQSHRL VEDPVT+EYITR+IA L+QKYTQS G RPFG+S LI GFD   G   L+QT+PSG F  +KANATGR++  +REF EK+ +E    +    +KLAIRALLEV +SG  N++VA+M
Sbjct:    3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQSGQNNLEVAIM 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.730e-67
Identity = 135/212 (63.68%), Postives = 167/212 (78.77%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE---TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            +RYDRA+T+FSPDG L QVEYA EAVRKG+ AVGVRG + + LGVEKKS  KLQ+ R+VRKI  LD H+ +A AGL  DAR+LINRA++ECQSHRL VEDPVT+EYITRYIA L+QKYTQS G RPFG+S LI GFD   G P L+QT+PSG F  +KANATG ++ ++REF EK  +E   ++ +  +KLAIRALLEV +SG  N++VA+M
Sbjct:    3 SRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKICVLD-HVVMAFAGL-TDARILINRAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSPYLFQTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLEVAQSGQHNLEVAIM 211          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.872e-67
Identity = 122/211 (57.82%), Postives = 164/211 (77.73%), Query Frame = 3
Query:   69 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            M+ YDRA++VFSPDG L QVEY  EAVR+G  A+ +RG + I +GVE+K+  KLQ+  + +KI  +DNH+ LA AGL ADAR+LI++AR+E Q+H+L + DPV++EY+TRY+AG+QQKYTQSGGVRPFG+STLI GFD     P +YQT+P+G ++AWKA A GR S + RE+LEKN KE  S  ETI LA+ +LLEVV++   NI++A+M
Sbjct:    1 MSGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVVQTASGNIELAIM 211          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.158e-66
Identity = 127/213 (59.62%), Postives = 165/213 (77.46%), Query Frame = 3
Query:   69 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQE---TIKLAIRALLEVVESGGKNIKVAVM 698
            M RYDRAIT+FSPDGHLFQVEYA EAV+KG+ AVGVRG D I +GVEKKS   LQD R++RKI  +D+H+ LA AGL ADARVL++RARIECQS++LT+EDPVTV YI+RYIA  +Q++TQS G RPFG+S LI GFD + G P L++T+PSG +  + ANATGR    +RE+LE+   E +  +   T+KL +++L +VV  G +NI++AVM
Sbjct:    1 MNRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFD-HDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVM 212          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 123/208 (59.13%), Postives = 154/208 (74.04%), Query Frame = 3
Query:   78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            YDRAITVFSPDGHLFQVEYA EAVRKG  AVGV+G D+I   VEKKS  KLQDSR+ RKI  LD HI LA AGL ADARV++N A++ECQ  RL+ ED + V+ + RY+A +QQ+ TQS G RP+G+ST+I GF+   G P L++T+PSGT SAW A A GRN   + EF+EKN ++  +    +  AI+ALLE VESG KNI++ V+
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNE-NGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGSKNIELLVL 209          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 124/212 (58.49%), Postives = 157/212 (74.06%), Query Frame = 3
Query:   72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE---TSGQETIKLAIRALLEVVESGGKNIKVAVM 698
            +RY RA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + + LGVEK S  ++Q+ R+VRKI  LD H+ALA AGL ADAR+LINR ++ECQSHRL  E+ VT+EYITRY+A L+QKYTQ  G RPFG+S LI G D   G   L+ T+PSG F  +KA ATGR +N++REF EK   +   T+  + IKLA+RALLEV +     ++VAV+
Sbjct:    3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDA-DGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVAVL 213          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 5.399e-58
Identity = 115/212 (54.25%), Postives = 150/212 (70.75%), Query Frame = 3
Query:   75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE--TSGQE--TIKLAIRALLEVVESGGKNIKVAVM 698
            RYDRA+T++SPDGHL QVEYA EAVR+G+  +G+R  + I +GVEK+S   LQ+ R VRKI  LD+H+ +  +GL ADAR+L++RA++E QSHRL  E P TVEYITRYIA L+Q YTQS G RPFGLS L+ GFD   G P L+QTDPSG F  W+AN TGR+S  +R+++EK+  E  T   E   IK  +R L+ V       ++VAV+
Sbjct:    4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDE-DGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAVL 214          
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA73_DROVI (Proteasome subunit alpha type-7-1B OS=Drosophila virilis GN=Pros28.1B PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.983e-49
Identity = 106/214 (49.53%), Postives = 142/214 (66.36%), Query Frame = 3
Query:   69 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETS----GQETIKLAIRALLEVVESGGKNIKVAVM 698
            M+R+D ++ ++S DGHL QVEYA EAVRKG+  VG+R  + + LGVEK++   LQ  R+ RKI  +D H+A+  AGL ADARVL++RA++E QSHRL  + P +VEYITRY+A L+Q YTQS   RPFG+S LI GFD   G P L+QTDPSG +  W AN TGR   ++ E+LEKN    S        +K  +RAL         +I++AV+
Sbjct:    1 MSRFDESVNIYS-DGHLLQVEYAQEAVRKGST-VGLRTKECVVLGVEKRAIDSLQIERTSRKIKKIDQHMAMTFAGLTADARVLVSRAQVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDE-DGRPRLFQTDPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRTPDAASAMKHVVRALFTATSLDPASIELAVL 211          
The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSA7_CHICK8.858e-7770.00Proteasome subunit alpha type-7 OS=Gallus gallus G... [more]
PSA7_YEAST8.580e-7259.07Proteasome component PRE6 OS=Saccharomyces cerevis... [more]
PSA71_DROME9.486e-7163.68Proteasome subunit alpha type-7-1 OS=Drosophila me... [more]
PSA71_DROVI3.730e-6763.68Proteasome subunit alpha type-7-1 OS=Drosophila vi... [more]
PSA7_SCHPO4.872e-6757.82Probable proteasome subunit alpha type-7 OS=Schizo... [more]
PSA7_CAEEL3.158e-6659.62Proteasome subunit alpha type-7 OS=Caenorhabditis ... [more]
PSA7_TRYBB6.163e-6259.13Proteasome subunit alpha type-7 OS=Trypanosoma bru... [more]
PSA72_DROME6.163e-6258.49Proteasome subunit alpha type-7-1A OS=Drosophila m... [more]
PSA73_DROME5.399e-5854.25Proteasome subunit alpha type-7-1B OS=Drosophila m... [more]
PSA73_DROVI5.983e-4949.53Proteasome subunit alpha type-7-1B OS=Drosophila v... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_F06 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bp
GGGGAAAGAAACTCGAATCAGAGAGACGCAGAAATCGATCGAGAAGAGGA
AAATTAGAGAGATTTGACATGGCGAGATACGATCGAGCAATCACTGTATT
TTCACCGGATGGCCACCTGTTCCAAGTGGAATACGCACTAGAGGCCGTAC
GCAAAGGCAACGCCGCCGTCGGCGTGCGCGGCACCGACACCATCGCTCTT
GGCGTCGAAAAGAAATCCACTGTCAAGCTTCAGGACTCCAGATCAGTGAG
GAAGATTGTCAGCTTGGATAATCATATTGCATTGGCCTGTGCTGGACTTA
AAGCAGATGCTCGTGTACTGATAAACAGGGCTCGAATAGAATGTCAGAGC
CACAGGCTGACTGTTGAGGACCCAGTAACTGTTGAGTACATCACTCGTTA
CATTGCAGGTCTCCAGCAGAAGTACACACAAAGCGGTGGTGTGAGACCAT
TTGGTCTTTCTACTCTGATTGTGGGCTTTGATCCATACACTGGCGTGCCA
TCACTATATCAGACAGATCCTTCTGGGACATTTTCTGCTTGGAAAGCTAA
TGCAACTGGGAGAAACTCTAATTCAATGAGGGAGTTTCTGGAGAAAAACT
GTAAGGAAACTTCCGGGCAAGAAACTATAAAGCTTGCAATTCGGGCATTA
CTTGAGGTTGTTGAGAGTGGGGGCAAAAACATAAAAGTTGCTGTGATGAT
CN
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