CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.516e-41 Identity = 87/201 (43.28%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVESGGK 677 YDRAIT+FSPDG L+QV+YA EAV+KG +GV+ + L EK+ +L D S+ K+ LD+H+ + AGL +D R+LI+ AR + HRL ++P+ ++Y+T+ ++ ++Q YTQ GGVRPFG++ +I G D P L T+PSG F + A A G+ + E+ EKN +E + Q+TI L IRAL ++ G K Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGID-RGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALASTLKPGEK 209
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.516e-41 Identity = 90/197 (45.69%), Postives = 127/197 (64.47%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEVVE 665 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D + L V+K+ T +L ++ S+ KI +D+HI A +GL ADAR L++RAR+E Q +R++ ++ + VE I++ I +Q YTQ GGVRP+G + LI G D P L++TDPSG +KA A G N++ E E + +E I L + AL + E Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVD--DNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAE 203
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.592e-41 Identity = 94/212 (44.34%), Postives = 138/212 (65.09%), Query Frame = 3 Query: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGR-NSNSMREFLEKNCKETSGQETIKLAIRALLEVVE--SGGKNIKVAVM 698 A YDRAITVFSPDG LFQVEYA EAV++G ++GV+ + I L V+K+ T KL + +S+ KI +D HI A +GL ADAR +I +AR+E Q +R+T +P+ VE + + I ++Q YTQ GGVRPFG + LI+G G L++TDPSG +KA A G +M EF +K + + + I+LA+ A+ E E + +++++AV+ Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFG-TALIIGGVNGRGC-RLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEATEGKTTPESVEIAVI 216
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41 Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKN-CKETSGQETIKLAIRAL 650 YDR IT+FSPDG L+QVEYA EAV++G A+VG+R D I L +K+S L + SV KI D+H+ +A AG ADAR LI+ AR + Q +RL +PV +E +T+ + Q+YTQ GG RPFG++ LI G + G P LY+TDPSGT WKA + G + + ++E LE+N +E S E + LA+R + Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIE--DGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTI 199
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41 Identity = 84/200 (42.00%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+GV D + L EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++ ++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41 Identity = 84/200 (42.00%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+GV D + L EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++ ++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41 Identity = 84/200 (42.00%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+GV D + L EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++ ++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 5.997e-41 Identity = 84/200 (42.00%), Postives = 131/200 (65.50%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+GV D + L EKK T KL Q SRS K+ +D+H+A A AG+ +DA +L+N AR+ Q + L+ ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG +S WKA A G NS + + L+++ ++ + +E + LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.336e-40 Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQE-TIKLAIRALLEVVESG 671 YDR IT+FSPDG L+QVEYA EAV++G A+VGVR D + + ++ + L + S+ KI +D+H+ +A AG ADAR LI+ AR + Q +RL ++P +VE +T+ I Q+YTQ+GG RPFG++ L+ G + G P L++TDPSGT W+A A G + ++ FLE+ E E I+LA+RAL V E G Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIE--DGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALASVNEDG 205
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.976e-40 Identity = 82/200 (41.00%), Postives = 130/200 (65.00%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D + L EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D G LY +DPSG + WKA A G N+ + + L+++ K + + ++ +KLA++AL + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDS 202 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |