CB610981
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40 Identity = 89/199 (44.72%), Postives = 127/199 (63.82%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVESG 671 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + + L +K+S L + SV KI D+HI +A AG ADAR LI+ AR + Q +RL +P+ +E +T+ + Q+YTQ GG RPFG++ LI G + G P LY+TDPSGT WKA + G + +E LE+N + + + E I+LA+ A+ + G Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVE--NGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDEG 206
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.077e-40 Identity = 90/199 (45.23%), Postives = 128/199 (64.32%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLEVVESG 671 YDRAITVFSPDG LFQVEYA EAV+KG+ A+G++ ++ + L +KK KL + S+ KI +D+++A +GL ADARVLI+ ARI Q ++T V +E + + +A Q+YTQ GGVRP+G+S + G D P L+ DP+GT + +KA A G +++ FLEK KE S +E + L I+AL +E G Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIG--PRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLEEG 204
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.077e-40 Identity = 89/195 (45.64%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSGQET-IKLAIRALLEV 659 YDR IT+FSPDG L+QVEYA EAV++G A++G+R D + L V+K+ L + SV KI D+HI +A AG ADAR LI+ AR + Q ++L ++P+ VE +T+ + Q+YTQ GG RPFG++ +I G + G P LY+TDPSGT W+A A G + ++E+LE++ E+ E I LA+ AL V Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIE--DGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASV 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.077e-40 Identity = 91/195 (46.67%), Postives = 125/195 (64.10%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKETSG-QETIKLAIRALLEV 659 YDR IT+FSPDG L+QVEYA EAV++G A++GVR +D + L V+K+ L + SV KI D+HI +A AG ADAR LI+ AR + Q ++L +PV VE +T+ I Q+YTQ GG RPFG++ +I G G P L++TDPSGT WKA A G + +R++LE++ E E + LA+ AL V Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGI--VNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASV 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.631e-40 Identity = 81/200 (40.50%), Postives = 129/200 (64.50%), Query Frame = 3 Query: 75 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKL-QDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCK-ETSGQETIKLAIRALLEVVES 668 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D + L EKK T KL Q S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YTQ GG+RPFG+S L G+D + G LY +DPSG + WKA A G N+ + + L+++ K + + +E ++LA++ L + ++S Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGF-QLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDS 202
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39 Identity = 88/194 (45.36%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLE 656 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + + L V+K++ L + SV K+ +D+H+ A AG ADAR L++ AR + Q R+ ++P+ V +T+ + Q+YTQ GG RPFG++ LI G + G P L++TDPSGT + WKA A G N ++EFLE S + I LA+RAL E Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVE--GGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.477e-39 Identity = 88/194 (45.36%), Postives = 125/194 (64.43%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKE-TSGQETIKLAIRALLE 656 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + + L V+K++ L + SV K+ +D+H+ A AG ADAR L++ AR + Q R+ ++P+ V +T+ + Q+YTQ GG RPFG++ LI G + G P L++TDPSGT + WKA A G N ++EFLE S + I LA+RAL E Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVE--GGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39 Identity = 88/197 (44.67%), Postives = 125/197 (63.45%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNS-MREFLEKNCKETSGQETIKLAIRALLEVVE 665 YDRAITVFSPDG L+QVEYA EAV++G AVG++ D I L V+K+ KL + S+ KI +DNHI +A +GL DAR L++RAR+E Q +R++ ++ + VE +++ + Q YTQ GG RP+G + LI G G L++TDPSGT +KA G N+ M+ F E+ E S ++ I L ++AL E Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGIS--DGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKALHAATE 203
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39 Identity = 86/199 (43.22%), Postives = 126/199 (63.32%), Query Frame = 3 Query: 78 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKNCKET-SGQETIKLAIRALLEVVESG 671 YDRAITVFSPDG LFQVEYA EAV+KG+ A+G++ + + L +KK +L + S+ KI +D+++A +GL ADARVL++ ARI Q ++T V +E + + +A Q+YTQ GGVRP+G+S + G D P L+ DP+GT + +KA A G +++ FLE+ KE +E + L I+AL +E G Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIG--PRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEG 204
BLAST of CB610981 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.613e-39 Identity = 84/197 (42.64%), Postives = 117/197 (59.39%), Query Frame = 3 Query: 69 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIALGVEKKSTVKLQDSRSVRKIVSLDNHIALACAGLKADARVLINRARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSLYQTDPSGTFSAWKANATGRNSNSMREFLEKN-CKETSGQETIKLAIRALLE 656 M+ +T FSP G L Q+EYA A KG A+GV+ TD + + EKK+T L DS ++ K+ +LD+H+ +G+ D RVL++ AR CQ +RLT +P+ + + R I+ L Q++TQSGGVRPFG S L+ G D LYQ DPSGTF WKA + G+ S R FLEK E ++ + A+ L E Sbjct: 1 MSESSYGLTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGN--HLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKE 195 The following BLAST results are available for this feature:
BLAST of CB610981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610981 ID=CB610981; Name=CB610981; organism=Citrus sinensis; type=EST; length=702bpback to top |