CB610989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_STRIN (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus iniae GN=sodA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.029e-15 Identity = 50/139 (35.97%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 208 EIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTK 603 E M LHH KHH YV N N A+E+ L + L V+ S ++ A+ NGGGH+NH++FW+ L+P + AID FG +A ++ +A GSGW WL + T+ L + +TANQD +++ Sbjct: 5 ETMTLHHDKHHATYVANANAALEKHPEIGENLEELLANVE-SIPADIRQALINNGGGHLNHALFWELLSPEK----TEVTKEVASAIDQAFGSFDAFKEQFAAAATGRFGSGWAWL-VVTKEGSLEITSTANQDTPISE 137
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_STRAI (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus acidominimus GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 1 Query: 199 ISGEIMQLHHQKHHQAYVTNYNKAVEQ-------LFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 633 I E M LHH KHH YV N N A+E+ L L+ VD + ++ A+ NGGGH+NH++FW+ L+P + L ID FG +A + + GSGW +L ++ + K L V +TANQD +T+ L P+L + Sbjct: 2 IDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLSDVD-ALPADIRQALINNGGGHLNHALFWELLSPEK----TEISAELAADIDETFGSFDAFKEAFTTAATTRFGSGWAFLVVNPKGK-LEVISTANQDTPITQG--LKPILAL 145
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_STRAY (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus alactolyticus GN=sodA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 199 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 633 I E M LHH KHH Y+ N N A+E+ + ++ T ++ A+ NGGGH+NH++FW+ L P + EP L AI+ FG E + GSGW WL ++ E K L V +T NQD +++ P+LG+ Sbjct: 2 IDKETMILHHDKHHATYLANANAALEKHPEIGEDLEFLLSDVTRIPEDIRQALINNGGGHLNHALFWELLTPEKQ---EPTAEVLA-AIEDAFGSFEDFKTAFTQAATTRFGSGWAWLVVNQEGK-LEVMSTGNQDNPISQGKQ--PILGL 145
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_HALHI (Superoxide dismutase [Mn] (Fragment) OS=Haloarcula hispanica GN=sod PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 48/148 (32.43%), Postives = 63/148 (42.57%), Query Frame = 1 Query: 247 YVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYL 690 YV A E L + D + G + NG GH H++FW+N+ P GGGEP L I+ FG E K E AA GW L D K+L D P+L +DVWEH+YY Y + D++ Sbjct: 2 YVNGLESAEETLAENRESGDFGSSAAAMGNVTHNGCGHYLHTLFWENMDP--NGGGEPEGELLD-RIEEDFGSYEG--WKGEFEAAASAAGGWALLVYDPVAKQLRNVPVDKHDQGALWGSH--PILALDVWEHSYYYDYGPARGDFI 142 The following BLAST results are available for this feature:
BLAST of CB610989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610989 ID=CB610989; Name=CB610989; organism=Citrus sinensis; type=EST; length=789bpback to top |