CB610989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.522e-54 Identity = 107/193 (55.44%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASD 732 TLPDLP+DY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNGGGH+NHSIFW NLA + GGEP + I FG L+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYYLQYKNV+PDY+ IW + NWK S+ Sbjct: 27 TLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPALKFNGGGHINHSIFWTNLA---KDGGEPSKELMD-TIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIANWKNISE 211
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_ONCVO (Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus GN=sod-2 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.597e-54 Identity = 109/212 (51.42%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 109 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 744 +GK+ L + L+ V LPDLPYDY ALEP +S EIMQ+HH KHH AYV N+A E++ +AL K DT V + FN GGH+NH++FW+ L V G P+S L AI FG LE +I K++A+ A+QGSGW WL D E KRL + NQD L+ L+PL IDVWEHAYYLQYKN++PD++K IW + NWK SD Y K Sbjct: 13 VGKNYCLNTQRLKHV-LPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNTGGHINHTLFWEGLTAVKNSG--EPNSELMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAYDKEMKRLQLACCPNQD-LLEPTTGLIPLFCIDVWEHAYYLQYKNLRPDFVKAIWKIANWKIISDRYIK 220
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.785e-54 Identity = 99/190 (52.11%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKY 723 LP LPYDY ALEP IS EIMQLHHQKHHQ Y+ N N+A++ L A D + ++ + A++FNGG H+NHS+FW+ LAP +GGG PP L I+ +G + ++ AA+QGSGW WL + + L+V+TTANQDPL +A T ++PLLG+DVWEHAYYLQYKN + DYLK+ +++NW Y Sbjct: 8 LPALPYDYDALEPVISAEIMQLHHQKHHQGYINNLNEALKSLDVANATQDLARLIAINPALRFNGGSHINHSLFWEMLAPQGKGGGVPPRHELLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWLAFCPQKQELMVQTTANQDPL--EATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSFPSIINWDY 195
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.785e-54 Identity = 110/196 (56.12%), Postives = 133/196 (67.86%), Query Frame = 1 Query: 127 LGLRGL-QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVM 711 LG+ G+ Q +LPDLPYDY AL+P I+ EIMQLHH KHH AY+ N N A E+ +AL K D + V LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FG + +K++A +QGSGW WLG + E L + +NQDPL L+PLLGIDVWEHAYYLQ KNV+PDYLK IW V+ Sbjct: 17 LGILGVRQKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGDVTAQVALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGFNKERGCLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQLKNVRPDYLKAIWKVI 208
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 209.92 bits (533), Expect = 1.289e-53 Identity = 104/205 (50.73%), Postives = 139/205 (67.80%), Query Frame = 1 Query: 130 GLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 744 G+RG T LP LPYDY+ALEP I EIM+LHHQKHHQ YV N N A EQL +A +K DT+ ++QL A++FNGGGH+NH+IFW+NL+P P L AI++ + LE ++++ A+QGSGW WLG + + +L + NQDPL + L+PL GIDVWEHAYYLQYKNV+P Y++ IW++ NW S +Q+ Sbjct: 14 GVRGKHT--LPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP----NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPL-EASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIANWDDISCRFQE 211
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 8.353e-53 Identity = 112/203 (55.17%), Postives = 137/203 (67.49%), Query Frame = 1 Query: 136 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 738 RG+ T TLP LPY Y+ALEPA+S IM+LHH KHHQ YV N N A E+L A +D V LQ AIKFNGGGH+NHS+FWK LAP EGGG+P S SL AI + +G LE ++M+A A++QGSGW WL +D + L + TTANQD +V P++GID WEHAYY QY+N K +Y K IWNV+NWK A Y Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIVDKD-GSLRITTTANQDTIVKSK----PIIGIDAWEHAYYPQYENRKAEYFKAIWNVINWKEAESRY 215
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.575e-51 Identity = 99/194 (51.03%), Postives = 135/194 (69.59%), Query Frame = 1 Query: 154 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 726 +LP+L Y++SA EP ISG+I ++H+ KHHQ YV N N ++EQ +A +K + +V L+ AI FNGGG++NH ++WKNLAPV +GGG+PP S LG I FG L+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYYLQY+NVK DY KN+W+V+NWK A Sbjct: 37 SLPELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVKKLVALEKAINFNGGGYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYYLQYQNVKADYFKNLWHVINWKEA 228
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_CHAFE (Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.057e-51 Identity = 111/194 (57.22%), Postives = 132/194 (68.04%), Query Frame = 1 Query: 115 KSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLK 693 +S+ GL Q TLPDLPYDY ALEP IS EIMQLHH KHHQ YV N N A E+L +A K D ST++ L A++FNGGGH+NHSIFW+NL+ GGEP L AI+ FG +E + ++SA+ A+QGSGW WLG E L + T NQDPL +A T LVPL GIDVWEHAYYLQYKNV+ LK Sbjct: 10 RSLRAGLWCRQKHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAKEKGDVSTIISLAPALRFNGGGHINHSIFWQNLS---ADGGEPEGELLA-AINRDFGSVENMKNQLSAQTVAVQGSGWGWLGYIAE-GALQIATCPNQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRRIMLK 196
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.687e-51 Identity = 101/194 (52.06%), Postives = 133/194 (68.56%), Query Frame = 1 Query: 157 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYA 726 LPDLPY Y+ALEP IS +IM+LHH+KHHQ YV + N A + +A + + LQ A+KFNGGGH+NHS+FWKNLAP GG L AI+ ++G ++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+YLQY NVK DYL IW V+N+K A Sbjct: 5 LPDLPYAYNALEPFISQQIMELHHKKHHQTYVNSLNAAEQAYAKASTPKER---IALQSALKFNGGGHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFYLQYLNVKADYLAAIWIVINFKEA 191
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.285e-49 Identity = 109/227 (48.02%), Postives = 140/227 (61.67%), Query Frame = 1 Query: 88 ATRKAIGLGKSVGLGLRGLQT----VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKV--------DTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 729 A A L K GL L VTLPDL +D+ ALEP ISG+I +LH+ KHHQ YV +N AV+Q FQ L+ + + ++ +Q IKF+GGG NH +FW+NLAP +GGGEPP +L AID FG L+ LI+ + + A +QGSGW ++ + + +L V T NQD T LVPL+ ID WEHAYYLQY+N K DY K IWNV+NWK AS Sbjct: 3 AKTAAANLTKKGGLSLLSTTARRTKVTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYYLQYQNKKADYFKAIWNVVNWKEAS 225 The following BLAST results are available for this feature:
BLAST of CB610989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610989 ID=CB610989; Name=CB610989; organism=Citrus sinensis; type=EST; length=789bpback to top |