CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.294e-50
Identity = 88/117 (75.21%), Postives = 102/117 (87.18%), Query Frame = 3
Query:  171 LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            L   +SDRYLP+VG++LP+S+DWR+KG +  VKDQGSCGSCWAFS +AA+E IN IVTG+LISLSEQELVDCD SYNEGC+GGLMDYAFEF+I NGGIDTEEDYPYK  +G CD YR
Sbjct:    2 LSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYR 118          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 4.748e-49
Identity = 102/166 (61.45%), Postives = 121/166 (72.89%), Query Frame = 3
Query:   33 DNLRFIDEHNS---ENRTYKVGLNRFADLTNEEYRSMYLGAR-FGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV-AEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            DNL+F+D HN+   E   +++G+NRFADLTN E+R+ YLG    G  R   ++ R D       EALPDSVDWR KGAV A VK+QG CGSCWAFS +AAVEGINKIVTG L+SLSEQELV+C     N GCNGG+MD AF FI  NGG+DTEEDYPY A+DG C+
Sbjct:   94 DNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGV-----EALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCN 254          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.748e-49
Identity = 94/170 (55.29%), Postives = 118/170 (69.41%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K+++    K N   +   N  ++ YK+ LN+FAD+TN E+R+ Y G++    R      R +  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCDT  N+GCNGGLMDYAFEFI   GGI TE +YPY+A DG+CD
Sbjct:   54 KQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCD 223          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 8.098e-49
Identity = 96/163 (58.90%), Postives = 117/163 (71.78%), Query Frame = 3
Query:   30 KDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTS--LKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K+N++FI E N + +  YK+ LN+F D+TN+E+RS Y G++    R+   ++          VG     S+DWR KGAV  VKDQG CGSCWAFSTIA+VEGIN+I TG L+SLSEQELVDCDTSYNEGCNGGLMDYAFEFI  N GI TE+ YPY   DG+C
Sbjct:   64 KENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFIQKN-GITTEDSYPYAEQDGTC 225          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.527e-47
Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K  ++   +DNLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    S+RY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI++NGG+ T+ DYPYKA++G C+
Sbjct:   73 KERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCE 240          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.995e-47
Identity = 89/169 (52.66%), Postives = 119/169 (70.41%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K  ++   +DNLRFI+  N+EN +Y++GL  FADL+  EY+ +  GA     R  +    SDRY     + LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI+ NGG+ T+ DYPYKA++G CD
Sbjct:   66 KERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCD 233          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 9.899e-47
Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K NL  +   N  ++ YK+ LN+FAD+TN E+RS Y G++    R    +   +  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFST+ AVEGIN+I T  L++LSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPYKA +G+CD
Sbjct:   64 KANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCD 225          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.689e-46
Identity = 90/162 (55.56%), Postives = 114/162 (70.37%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            K N+  +   N  ++ YK+ LN+FAD+TN E+RS Y G++    +    S+  S  ++     ++P SVDWRKKGAV +VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQELVDCD   N+GCNGGLM+ AFEFI   GGI TE +YPY A +G+CD
Sbjct:   64 KANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCD 225          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.981e-43
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            K  +    K N  FI  HN   +  Y++ LNRF D+   E+R+ ++G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R
Sbjct:   62 KHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 234          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.893e-43
Identity = 88/173 (50.87%), Postives = 110/173 (63.58%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            K  +    K N  FI  HN   +  Y++ LNRF D+   E+R+ ++G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+DCDT+ N+GC GGLMD AFE+I +NGG+ TE  YPY+A  G+C+  R
Sbjct:   62 KHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVAR 234          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSPL_SOLLC4.294e-5075.21Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP1_ORYSJ4.748e-4961.45Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_RICCO4.748e-4955.29Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSP_HEMSP8.098e-4958.90Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CPR4_ARATH1.527e-4753.25Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH1.995e-4752.66Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSEP_PHAVU9.899e-4754.94Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSEP_VIGMU1.689e-4655.56Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSP2_HORVU2.981e-4350.87Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU3.893e-4350.87Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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