CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.629e-15
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 3
Query:   81 KVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K  +N  +DL+ +E+++ YL     F   +T                 +P  +D R    V  ++ QG CGSCWAFS +AA E        + + LSEQELVDC + +  GC+G  +    E+I  NG ++ E  YPY A +  C
Sbjct:   61 KGAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVNVPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCASQH--GCHGDTIPRGIEYIQQNGVVE-ERSYPYVAREQRC 202          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP3_CARCN (Cysteine proteinase 3 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.305e-14
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 347
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTIA VEGINKIV G
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIATVEGINKIVHG 43          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 2.226e-14
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 3
Query:   81 KVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K  +N  +DL+ +E+++ +L     F   +T                +LP  +D R    V  ++ QG CGSCWAFS +A+ E          + L+EQELVDC  +   GC+G  +    E+I  NG +  E  YPY A + SC
Sbjct:   61 KGAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC--ASQNGCHGDTIPRGIEYIQQNGVVQ-EHYYPYVAREQSC 202          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP4_CARCN (Cysteine proteinase 4 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.797e-14
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 347
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTI  VEGINKI TG
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIVTVEGINKIRTG 43          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP2_CARCN (Cysteine proteinase 2 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.476e-14
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 347
            P SVDWR+KGAV  VKDQ  CGSCWAFST+A VEGINKIVTG
Sbjct:    2 PGSVDWRQKGAVTPVKDQNPCGSCWAFSTVATVEGINKIVTG 43          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.884e-13
Identity = 47/142 (33.10%), Postives = 70/142 (49.30%), Query Frame = 3
Query:   90 LNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            +N  +DL+ +E+++ +L     F   +T              G A P  +D R+   V  ++ QG CGSCWAFS +AA E          + L+EQELVDC + +  GC+G  +    E+I  NG +  E  Y Y A + SC
Sbjct:   64 INHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNA-PAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCASQH--GCHGDTIPRGIEYIQHNGVVQ-ESYYRYVAREQSC 201          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.083e-12
Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 3
Query:   63 SENRTYKVGL-NRFADLTNEEYRSMYLGARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG---SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA----IDGSCDT 515
            S N  +K G+  RF  LT +E  S+ +   F   AK  + +   +D+      + +P+S D+R++    + EV DQG CGSCWAFS++A   G  + V G     +  S Q +V CD   +  CNGG +   ++F+    G  T+E  PYK+    + G+C T
Sbjct:   26 SLNPRWKAGIPKRFEGLTKDEISSLLMPVSFLKNAKGAAPRGTFTDK------DDVPESFDFREEYPHCIPEVVDQGGCGSCWAFSSVATF-GDRRCVAGLDKKPVKYSPQYVVSCDHG-DMACNGGWLPNVWKFLTKT-GTTTDECVPYKSGSTTLRGTCPT 179          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11
Identity = 54/164 (32.93%), Postives = 79/164 (48.17%), Query Frame = 3
Query:   63 SENRTYKVGL-NRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPR---VGEALPDSVDWRKK--GAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG---SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKA----IDGSCDT 515
            S N  +K G+  RF  LT +E  S+ +   F         KR    +PR        PDS D+R++    + EV DQG CGSCWAFS++A+V G  +   G     +  S Q +V CD   +  C+GG +   + F+    G  T+E  PY++      G+C T
Sbjct:   26 SLNPRWKAGIPKRFEGLTKDEISSLLMPVSF--------LKRDRAAVPRGTVSATQAPDSFDFREEYPHCIPEVVDQGGCGSCWAFSSVASV-GDRRCFAGLDKKAVKYSPQYVVSCDRG-DMACDGGWLPSVWRFLTKT-GTTTDECVPYQSGSTGARGTCPT 178          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11
Identity = 44/101 (43.56%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  228 SVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG----SLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDG-SCDT 515
            +VDW        ++DQG CGSCWAF++ AA+E    I  G    S + LS Q  V+C  S   GCNGG     F F     GI  E+D PYKA+ G SC T
Sbjct:  243 TVDWTSYQT--PIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNCIAS---GCNGGWSGNYFNF-FKTPGIAYEKDDPYKAVTGTSCIT 337          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
PEPT1_DERFA2.629e-1533.10Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
CYSP3_CARCN1.305e-1483.33Cysteine proteinase 3 (Fragment) OS=Carica candama... [more]
PEPT1_EURMA2.226e-1432.41Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]
CYSP4_CARCN3.797e-1480.95Cysteine proteinase 4 (Fragment) OS=Carica candama... [more]
CYSP2_CARCN6.476e-1480.95Cysteine proteinase 2 (Fragment) OS=Carica candama... [more]
PEPT1_DERPT1.884e-1333.10Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATB2_GIALA2.083e-1233.13Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CATB3_GIALA3.008e-1132.93Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
GMSA_DICDI8.753e-1143.56Gamete and mating-type specific protein A OS=Dicty... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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