CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.464e-31
Identity = 74/163 (45.40%), Postives = 97/163 (59.51%), Query Frame = 3
Query:   36 NLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D SC
Sbjct:   54 NLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESC 211          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.945e-31
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 3
Query:   33 DNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            +N R I  HN  N T+K+GLN+F+D++  E +  YL +          S     YL   G   P S+DWRKKG  V+ VK+QG+CGSCW FST  A+E    I +G +++L+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  E+ YPY   +G C
Sbjct:   58 NNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.299e-30
Identity = 72/162 (44.44%), Postives = 94/162 (58.02%), Query Frame = 3
Query:   36 NLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            NL+ I  HN E      TY++ +N   D+T+EE      G +    R+         Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  N GID+E+ YPY   D SC
Sbjct:   53 NLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSH---SNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESC 210          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.216e-30
Identity = 72/171 (42.11%), Postives = 109/171 (63.74%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPYKAIDG 503
            +++++ + + NL  + EH + N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TE+ YPY + +G
Sbjct:   55 EQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.216e-30
Identity = 72/171 (42.11%), Postives = 109/171 (63.74%), Query Frame = 3
Query:    6 KREKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL-GARF--GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEEDYPYKAIDG 503
            +++++ + + NL  + EH + N   + G+ +F DL+  E+ + YL GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV CD   N+GC+GGLM  AF++++   NG + TE+ YPY + +G
Sbjct:   55 EQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCD-DMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNG 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.216e-30
Identity = 72/168 (42.86%), Postives = 101/168 (60.12%), Query Frame = 3
Query:   36 NLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV-----GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            N++ I EHN  +     TY +GLN+F D+T EE+++ YL         +  S+ SD     V       A+PD +DWR+ G V EVKDQG+CGSCWAFST   +EG       + IS SEQ+LVDC   + N GC+GGLM+ A+++ +   G++TE  YPY A++G C
Sbjct:   47 NVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYL---------TEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQY-LKQFGLETESSYPYTAVEGQC 204          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.216e-30
Identity = 72/163 (44.17%), Postives = 97/163 (59.51%), Query Frame = 3
Query:   36 NLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E+ YPY   D +C
Sbjct:   54 NLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENC 211          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.936e-30
Identity = 63/167 (37.72%), Postives = 98/167 (58.68%), Query Frame = 3
Query:   12 EKV*DLKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            E+  + K   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   D  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AF+++++ G + TE +YPY   +G C
Sbjct:  244 ERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLC 406          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.446e-30
Identity = 58/96 (60.42%), Postives = 72/96 (75.00%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            P+S+DWR KGAV  VK+Q  CGSCWAFST+A VEGINKI TG LISLSEQEL+DCD   + GC GG    + +++ DNGG+ TE++YPY+   G C
Sbjct:    2 PESIDWRDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR-SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKC 96          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.419e-30
Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 3
Query:   33 DNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            +N R I  HN  N T+K+ LN+F+D++  E +  +L +          S     YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  E+ YPY   D SC
Sbjct:   58 NNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSE-----PQNCSATKSNYLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSC 212          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATK_CANFA4.464e-3145.40Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATH_RAT9.945e-3144.10Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATK_RABIT1.299e-3044.44Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
LMCPB_LEIME2.216e-3042.11Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI2.216e-3042.11Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATLL_FASHE2.216e-3042.86Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATK_PIG2.216e-3044.17Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CFAD_DICDI4.936e-3037.72Counting factor associated protein D OS=Dictyostel... [more]
MEX2_JACME6.446e-3060.42Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATH_MOUSE8.419e-3043.48Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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