CB611025

Overview
NameCB611025
Unique NameCB611025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.100e-29
Identity = 73/172 (42.44%), Postives = 98/172 (56.98%), Query Frame = 3
Query:   30 KDNLRFIDEHN----SENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD---------TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGS 506
            K NL  I+E N    +     K G+N+FADL+++E+++ YL  +       L    +D        ++P + DWR +GAV  VK+QG CGSCW+FST   VEG + I    L+SLSEQ LVDCD          + +EGCNGGL   A+ +II NGGI TE  YPY A  G+
Sbjct:   53 KSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLNNKEAIFTDDLPV--ADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGT 222          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 68/166 (40.96%), Postives = 104/166 (62.65%), Query Frame = 3
Query:   30 KDNLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            K+N  +I + N+  ++   +++GLN+FAD+T +E+   YL A    K  S + K +++ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T++DYPY+A +G C
Sbjct:   69 KNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRAKEGRC 230          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.436e-29
Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYR 521
            P SVDWR+KG V  VKDQG CGSCWAFST  A+EG +    G L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGGID+EE YPY A D     Y+
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYK 102          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.127e-29
Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 3
Query:  216 ALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            A+P S+DWR  GAV EVK+QG CG CWAF+ IA VEGI KI  G+L+ LSEQE++DC  SY  GC GG ++ A++FII N G+ T+E+YPY+A  G+C+
Sbjct:    1 AVPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDCAVSY--GCKGGWVNRAYDFIISNNGVTTDENYPYRAYQGTCN 97          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.588e-28
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 3
Query:  219 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVD      N+GCNGGLMD AF++I +NGG+D+EE YPY+A D SC+
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCN 99          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.074e-28
Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 3
Query:  222 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            P+S+DWR+KGAV  VK+Q  CGSCWAFST+A +EGINKI+TG LISLSEQEL+DC+   + GC+GG    + ++++DN G+ TE +YPY+   G C
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR-SHGCDGGYQTPSLQYVVDN-GVHTEREYPYEKKQGRC 95          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.074e-28
Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 3
Query:   33 DNLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDT 515
            DNL +I   + ++E+ TY + LN+FAD++ +E+ S YL  R    +T+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE++ DN G+   +DYPY A DG+C T
Sbjct:   52 DNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLR--VPKTAKLNASNANFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFEYVADN-GLAEAKDYPYTAKDGTCKT 209          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.620e-28
Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 3
Query:   75 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCD 512
            T + G+ +F+DLT EE+R++YL      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE+DY Y+    SC+
Sbjct:  228 TAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCN 367          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 3
Query:   87 GLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN--GGIDTEEDYPYKAIDG 503
            G+  F+D+T EE+R+ Y   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++  G + TE  YPY + +G
Sbjct:   85 GVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNG 221          
BLAST of CB611025 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.880e-28
Identity = 66/145 (45.52%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   75 TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSC 509
            ++++ +N   D+T+EE      G R    R          Y+P      P +VDWR+KG V  VKDQG CGSCWAFS++ A+EG  K  TG L+SLS Q LV C  S N GC GG M  AFE++  N GID+E+ YPY   D SC
Sbjct:   75 SFQLAMNYLGDMTSEEVVRTMTGLRVPRSRPR---PNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC-VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESC 215          
The following BLAST results are available for this feature:
BLAST of CB611025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSP1_DICDI1.100e-2942.44Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
P34_SOYBN1.436e-2940.96P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATL1_CHICK1.436e-2961.39Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
MDO1_PSEMR7.127e-2957.58Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATL1_SHEEP1.588e-2860.61Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
MEX1_JACME2.074e-2857.29Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATL2_PARTE2.074e-2843.98Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATF_HUMAN4.620e-2845.89Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CYSP_TRYBB6.034e-2847.52Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATK_CHICK7.880e-2845.52Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C03 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611025 ID=CB611025; Name=CB611025; organism=Citrus sinensis; type=EST; length=549bp
GGGGAAAAAGAGAAAAGGTTTGAGATCTTAAGGACAATCTTAGGTTTATT
GATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTTGAACCGGTT
TGCTGATTTGACCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCT
TTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTG
CCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGG
AGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCAT
TTTCAACCATTGCTGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGC
CTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAA
TGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTG
ATAATGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGAT
GGTAGCTGTGACACATATCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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