CB611026

Overview
NameCB611026
Unique NameCB611026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:200..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  F++R  E+  I  KY DR+PVI E+  K+D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV D LP TA LM S+Y   KDEDGFLY+ Y+SE TF
Sbjct:    6 FKDEHPFDKRKAEAERIRQKYQDRIPVICEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31
Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E   E+R  ES  I  KY DR+PVI E+  K D+P+++KKK+LVP D++VGQF++++  R+ L+P KA+FVFVK+TLP TA+LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31
Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E   E+R  ES  I  KY DR+PVI E+  K D+P+++KKK+LVP D++VGQF++++  R+ L+P KA+FVFVK+TLP TA+LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E   E+R  E+  I  KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+  KA+F+FVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E   E+R  E+  I  KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+  KA+F+FVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 59/112 (52.68%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E+ FE+R  ES  I  K+ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA LM +VY   KD+DGFLY+ YS E TF
Sbjct:    4 SFKSEYPFEKRKTESERITEKFQNRIPVICEKAEKSDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.287e-31
Identity = 58/111 (52.25%), Postives = 84/111 (75.68%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKD+F+FE+R  ES+ I  KYPDR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+F+ + LP TA LM ++Y   K EDGFLY+ YS E TF
Sbjct:    5 FKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31
Identity = 58/112 (51.79%), Postives = 83/112 (74.11%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            +FK+E +FE+R  E+  I  KYPDR+PVI E+  + D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV + LP TA LM ++Y   KDEDGFLY+ YS E TF
Sbjct:    4 AFKNEHSFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31
Identity = 59/114 (51.75%), Postives = 81/114 (71.05%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSYE 414
            FKDE  FE+R  E+  I  KYPDR+PVI E+  + D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV + LP TA LM ++Y   KDED FLY+ YS E TF  E
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFGQE 118          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.517e-31
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I AKY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8_CRYNE4.272e-3154.05Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8A_ORYSJ4.272e-3156.25Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI4.272e-3156.25Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8C_ORYSJ5.579e-3154.46Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI5.579e-3154.46Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8_VANPO7.287e-3152.68Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_SCHPO7.287e-3152.25Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_USTMA9.517e-3151.79Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]
ATG8_LACBI9.517e-3151.75Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_EMENI9.517e-3154.05Autophagy-related protein 8 OS=Emericella nidulans... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bp
GGGGAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAGTTGAGACGATAC
GGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAAA
GACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCCC
GTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGAA
AAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATTT
TAAGCAGCAGGCTTCACCTGACCCCTGGAAAGGCTCTCTTTGTATTTGTG
AAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGGATC
CTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAAA
CCTTTAGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCAT
GGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATGT
ATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTTTATTC
TGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAACTTGCG
TGTGGATATAACTTATGATTCCATCAACCTGCTTTGACGTTTCATATGCA
ATCTATTTTTTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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