CB611026

Overview
NameCB611026
Unique NameCB611026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:200..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK E   E+R  ES  I  KYPDR+PVI ER  ++D+P+++KKK+LVP D++VGQF++++  R+ L+  KA+FVFVK+TLP TA +M ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK     E R+ ES  I AKYP+RVPVI E+  ++D+PD++KKK+LVP D+++GQF++++  R+ L   KA+FVFVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SFK     E R+ ES  I  KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L   KA+FVFVK+TLP TA LM ++Y   KDEDGFLYM YS E TF
Sbjct:    5 SFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTF 116          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.120e-30
Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1
Query:   64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSYERIQ 423
            M SFK E+ FE+R  ES  I +++ +RVPVI ER  K+D+P+++++K+LVP D++VGQF++++  R+ L   KA+F+FV DTLP TA LM +VY   KD+DGFLY+ YS E TF  E  Q
Sbjct:    1 MSSFKSEYPFEKRKAESERICSQFENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFGSEENQ 120          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_YARLI (Autophagy-related protein 8 OS=Yarrowia lipolytica GN=ATG8 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DRVPVI E+  K+D+P ++KKK+LVP D++VGQF++++  R+ L+  +A+F+FV D LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRRAEAERIRKKYDDRVPVICEKVEKSDIPVIDKKKYLVPADLTVGQFVYVIRKRIKLSSERAIFIFVDDVLPPTAALMSSIYEEHKDEDGFLYVTYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_SCLS1 (Autophagy-related protein 8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYISYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTF 115          
The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8C_ARATH1.243e-3055.36Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ARATH1.243e-3055.36Autophagy-related protein 8b OS=Arabidopsis thalia... [more]
ATG8A_ARATH1.243e-3055.36Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8_ASHGO2.120e-3050.83Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_YARLI3.616e-3054.05Autophagy-related protein 8 OS=Yarrowia lipolytica... [more]
ATG8_SCLS13.616e-3053.15Autophagy-related protein 8 OS=Sclerotinia sclerot... [more]
ATG8_PODAN3.616e-3053.15Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_PENCW3.616e-3053.15Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEUCR3.616e-3053.15Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_NEOFI3.616e-3053.15Autophagy-related protein 8 OS=Neosartorya fischer... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bp
GGGGAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAGTTGAGACGATAC
GGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAAA
GACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCCC
GTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGAA
AAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATTT
TAAGCAGCAGGCTTCACCTGACCCCTGGAAAGGCTCTCTTTGTATTTGTG
AAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGGATC
CTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAAA
CCTTTAGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCAT
GGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATGT
ATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTTTATTC
TGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAACTTGCG
TGTGGATATAACTTATGATTCCATCAACCTGCTTTGACGTTTCATATGCA
ATCTATTTTTTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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