CB611026

Overview
NameCB611026
Unique NameCB611026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:200..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 56/112 (50.00%), Postives = 84/112 (75.00%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            +FK E+ FE+R  ES  I  ++ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA LM ++Y   KD+DGFLY+ YS E TF
Sbjct:    4 TFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.057e-30
Identity = 58/111 (52.25%), Postives = 81/111 (72.97%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  KY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+Y   KD+DGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.374e-29
Identity = 56/111 (50.45%), Postives = 83/111 (74.77%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  K+ DR+PVI E+  ++D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA+LM ++Y  +KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFERRKAEASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.908e-29
Identity = 56/115 (48.70%), Postives = 82/115 (71.30%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSYER 417
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D+SVGQF++++  R+ L   KA+F+FV D LP TA L+ ++Y   KDEDGFLY+ YS E TF  ++
Sbjct:    5 FKDEHPFEKRQAEATRIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFGQKK 119          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  K+ DR+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ +   KA+F+F+ D LP TA LM  VY   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRKAEAMRIRYKFADRIPVICEKVEKSDIPEVDKRKYLVPCDLTVGQFVYVIRKRIKIPSEKAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSY 411
            SFK E   E+R  E+  I  KYPDR+PVI E+  K+D+P ++KKK+LVP D++VGQF++++  R+ L+  KA+F+FV + LP    LM SVY   KD+DGFLY+ YS E TF +
Sbjct:    5 SFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = 1
Query:   55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSYERI 420
            M K   FK +  FE+R  E+  I  KYPDR+PVI E+  K+++P+++KKK+LVP D++VGQF++++  R+ L+  KA+F+FV + LP T  LM SVY   KDEDGFLY+ YS E TF    I
Sbjct:    1 MNKGSIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGASSI 122          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28
Identity = 55/111 (49.55%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA L+ ++Y   KDEDGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.541e-28
Identity = 54/111 (48.65%), Postives = 80/111 (72.07%), Query Frame = 1
Query:   73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA L+ ++Y   KD+DGFLY+ YS E TF
Sbjct:    5 FKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTF 115          
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8G_ARATH (Autophagy-related protein 8g OS=Arabidopsis thaliana GN=ATG8G PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.286e-27
Identity = 54/112 (48.21%), Postives = 81/112 (72.32%), Query Frame = 1
Query:   70 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405
            SF+ +  FE+R  E+  I  KY DRVPVI E+  K+D+P+++KKK+LVP D++VGQF++++  R+ L+  KA+F+FV + LP T  +M ++Y   K+EDGFLY+ YS E TF
Sbjct:    5 SFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTF 116          
The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8_YEAS76.169e-3050.00Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_COCIM8.057e-3052.25Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8_PICAN1.374e-2950.45Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_PICST8.908e-2948.70Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_PICPA1.163e-2850.45Autophagy-related protein 8 OS=Pichia pastoris GN=... [more]
ATG8F_ARATH1.163e-2850.00Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH1.163e-2849.18Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_CANAL3.385e-2849.55Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_LODEL7.541e-2848.65Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8G_ARATH1.286e-2748.21Autophagy-related protein 8g OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_C04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bp
GGGGAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAGTTGAGACGATAC
GGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAAA
GACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCCC
GTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGAA
AAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATTT
TAAGCAGCAGGCTTCACCTGACCCCTGGAAAGGCTCTCTTTGTATTTGTG
AAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGGATC
CTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAAA
CCTTTAGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCAT
GGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATGT
ATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTTTATTC
TGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAACTTGCG
TGTGGATATAACTTATGATTCCATCAACCTGCTTTGACGTTTCATATGCA
ATCTATTTTTTTTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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