CB611026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: GBRL3_HUMAN (Gamma-aminobutyric acid receptor-associated protein-like 3 OS=Homo sapiens GN=GABARAPL3 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 49/111 (44.14%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 +K+ FE R +E +I KYPDRVP+I E+ KA +PD++++K+LVP D++ GQF ++ R+HL P ALF FV +T+P T+ M +Y +ED FLY+ YS+E + Sbjct: 5 YKEVHPFEYRKKEGEKIRKKYPDRVPLIVEKAPKARVPDLDRRKYLVPSDLTDGQFYLLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEDSHEEDDFLYVAYSNESVY 115
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 67 QSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPG-----KALFVFV-KDTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 +SFK E++ E+R S +I +Y DR+P+I ER + +D+PD+ KKKFL P +M + F I+ R HL KA+F+FV K+ LP ++ L+ S+Y + KDEDGFLY+CYS E TF Sbjct: 6 KSFKQEYSLEKRKLISSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNF--IMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTF 122
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERY-SKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVK-DTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 M ++FK TFEQR+E+ R I ++P ++PVI ERY + LP ++K KFLVP +++ + I I+ RL L +A F+ V ++ +T + VY S KDEDGFLYM Y+S++TF Sbjct: 1 MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF 119
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3B_BOVIN (Microtubule-associated proteins 1A/1B light chain 3B OS=Bos taurus GN=MAP1LC3B PE=1 SV=4) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERY-SKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVK-DTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 M ++FK TFEQR+E+ R I ++P ++PVI ERY + LP ++K KFLVP +++ + I I+ RL L +A F+ V ++ +T + VY S KDEDGFLYM Y+S++TF Sbjct: 1 MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEVYESEKDEDGFLYMVYASQETF 119
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 M ++FK +FEQR+E+ R I ++P ++PVI ERY + LP ++K KFLVP +++ + I I+ RL L +A F+ V ++ +T + VY S +DEDGFLYM Y+S++TF Sbjct: 1 MPSEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETF 119
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 M ++FK +FEQR+E+ R I ++P ++PVI ERY + LP ++K KFLVP +++ + I I+ RL L +A F+ V ++ +T + VY S +DEDGFLYM Y+S++TF Sbjct: 1 MPSEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETF 119
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MP3B2_HUMAN (Microtubule-associated proteins 1A/1B light chain 3 beta 2 OS=Homo sapiens GN=MAP1LC3B2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18 Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 55 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERY-SKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVK-DTLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 M ++FK TFEQR+E+ R I ++P ++PVI ERY + LP ++K KFLVP +++ + I I+ RL L +A F+ V ++ +T + VY S KDEDGFLYM +S++TF Sbjct: 1 MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETF 119
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 64 MQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKAD-LPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 ++ FK + R EE I AK+P+++PV+ ERY + LP ++K KFLVP+++++ QF+ I+ SR+ L +A ++ V + +L + M +Y +KDEDGF+YM Y+S++TF Sbjct: 10 VRPFKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETF 125
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSY 411 FK +F R +E ++I ++P ++PVI ERY + LP ++K KFLVP +++ + + I+ RL L P +A F+ V ++ +T + +Y KDEDGFLYM Y+S++TF + Sbjct: 7 FKQRRSFADRCKEVQQIREQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSY 411 FK +F R +E ++I ++P ++PVI ERY + LP ++K KFLVP +++ + + I+ RL L P +A F+ V ++ +T + +Y KDEDGFLYM Y+S++TF + Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121 The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bpback to top |