CB611026
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSY 411 FK +F R +E ++I ++P ++PVI ERY + LP ++K KFLVP +++ + + I+ RL L P +A F+ V ++ +T + +Y KDEDGFLYM Y+S++TF + Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYS-KADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTFSY 411 FK +F R +E ++I ++P ++PVI ERY + LP ++K KFLVP +++ + + I+ RL L P +A F+ V ++ +T + +Y KDEDGFLYM Y+S++TF + Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF 121
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: ATG8E_ORYSJ (Putative autophagy-related protein 8E OS=Oryza sativa subsp. japonica GN=ATG8E PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 1 Query: 160 ERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYGSFKDE-DGFLYMCYSSEKTF 405 +++S+++LP+MEK+K LHL PG ALFVFV +TLPQTA LM SVY S+KDE DGFLY+CYSSEKTF Sbjct: 23 DKFSRSNLPEMEKRK-------------------LHLPPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTF 86
BLAST of CB611026 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 43/118 (36.44%), Postives = 73/118 (61.86%), Query Frame = 1 Query: 58 GKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERY-SKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKD-TLPQTATLMDSVYGSFKDEDGFLYMCYSSEKTF 405 G + SFK+ F +R ++ EI ++ P++VPVI ER+ + LP M++ KFLVP ++V + + I+ RL L P +A F+ V + ++ + M ++Y +D DGF+YM Y+S+ F Sbjct: 12 GIVPSFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAF 129 The following BLAST results are available for this feature:
BLAST of CB611026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611026 ID=CB611026; Name=CB611026; organism=Citrus sinensis; type=EST; length=697bpback to top |