CB611030

Overview
NameCB611030
Unique NameCB611030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.203e-33
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 1
Query:   67 DEVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKA-WXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLI 534
            ++V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P+ ES +IV+YIDE WK+  P+LPSD YQRA ARFW  FID K+  A +K+ +                    LE +L DK FFGG+ FG +D++ +
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAV 161          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.203e-33
Identity = 85/205 (41.46%), Postives = 114/205 (55.61%), Query Frame = 1
Query:   70 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL--SLIPFYYTY--ETFGKSSIEAE-CPKFKAWVKRCLQRETIAKALPDEKKVL 669
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPVHKK+PVLIHNG+P+ ES +I++YIDE ++  + +LP D Y RA ARFW  F+  K+  A    +                    L+ +L DK FF GD FG+ D+  +L+ F+     E +G   + +E  P F  W    +    + ++LP   ++L
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWSKFLGDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELL 205          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.150e-30
Identity = 85/217 (39.17%), Postives = 116/217 (53.46%), Query Frame = 1
Query:   70 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKA----PLLPSDRYQRAQARFWVDFIDKKMYDA--STKAWXXXXXXXXXXXXXXXXXXXXLEGQLGD----KPFFGGDNFGYLDLSLIPFYYTY----ETFGKSSIE-AECPKFKAWVKRCLQRETIAKALPDE-KKVLE 672
            E+ LL  W S + +RVR+ L  K + YEY EE+L +KS LLL  NPVHK +PVL+H GRPV ES +IVQYIDEVW   A     ++PSD Y+RA ARFW  ++D K+  A  +                        LEG  G+    KPFFGGD  G++D+ L  +   +    +  G+  I+ A  P   AW +R    +     +PD+  K+LE
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLE 222          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.310e-29
Identity = 71/152 (46.71%), Postives = 92/152 (60.53%), Query Frame = 1
Query:   70 EVILLDFWPSMFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDL 525
            EV LL    S F  RV  AL  KGVKYE+ EEDL+NKSPLLLQ NP+HKKIPVLIHNG+ +CES +I++YIDE ++  + +LP D Y RA ARFW  +++ K   A  K++                    L+ +  DK  F GD FG+ D+
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPS-ILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADI 152          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.545e-18
Identity = 76/212 (35.85%), Postives = 101/212 (47.64%), Query Frame = 1
Query:   97 SMFGMRVRIALAEKGVKYEYKEEDL-KNKSPLLLQMNPVHKKIPVLI-HNGRPVCESSIIVQYIDEVWKDKAP------LLPSDRYQRAQARFWVDFIDKKMYDA-STKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKP-----FFGGDNF-GYLDLSL---IPFYYTYETF-GKSSIEAEC-PKFKAWVKRCLQRETIAKALPDEKKVLE 672
            S F  R R+AL  +GV YE  +E L   KS  LL  NPV+ KIPVL+  +GR +CES++IVQYI++V ++         LLP D Y+RA  RFW  FID K + A    +                     LE    D+      F GGD   G LDL+L   +P     E   G S I+A   P    W +R        + LPD +KV++
Sbjct:    9 SPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQ 220          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: SSPA_SHIFL (Stringent starvation protein A OS=Shigella flexneri GN=sspA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 45/188 (23.94%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  100 MFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKK 663
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+     + ES II++Y+DE +    PL+P     R ++R ++  I+K  Y                           +    G KP+F  D F  +D  L P  +     G         + K ++ R  +R++   +L + ++
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAER 205          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: SSPA_ECOLI (Stringent starvation protein A OS=Escherichia coli (strain K12) GN=sspA PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 45/188 (23.94%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  100 MFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKK 663
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+     + ES II++Y+DE +    PL+P     R ++R ++  I+K  Y                           +    G KP+F  D F  +D  L P  +     G         + K ++ R  +R++   +L + ++
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAER 205          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: SSPA_ECOL6 (Stringent starvation protein A OS=Escherichia coli O6 GN=sspA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 45/188 (23.94%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  100 MFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKK 663
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+     + ES II++Y+DE +    PL+P     R ++R ++  I+K  Y                           +    G KP+F  D F  +D  L P  +     G         + K ++ R  +R++   +L + ++
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAER 205          
BLAST of CB611030 vs. ExPASy Swiss-Prot
Match: SSPA_ECO57 (Stringent starvation protein A OS=Escherichia coli O157:H7 GN=sspA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 45/188 (23.94%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  100 MFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCESSIIVQYIDEVWKDKAPLLPSDRYQRAQARFWVDFIDKKMYDASTKAWXXXXXXXXXXXXXXXXXXXXLEGQLGDKPFFGGDNFGYLDLSLIPFYYTYETFGKSSIEAECPKFKAWVKRCLQRETIAKALPDEKK 663
            ++  +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+     + ES II++Y+DE +    PL+P     R ++R ++  I+K  Y                           +    G KP+F  D F  +D  L P  +     G         + K ++ R  +R++   +L + ++
Sbjct:   20 IYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERF-PHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAER 205          
The following BLAST results are available for this feature:
BLAST of CB611030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTX6_SOYBN7.203e-3347.77Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX3_TOBAC7.203e-3341.46Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTU6_ORYSJ1.150e-3039.17Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX1_SOLTU6.310e-2946.71Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_MAIZE6.545e-1835.85Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
SSPA_SHIFL5.933e-1123.94Stringent starvation protein A OS=Shigella flexner... [more]
SSPA_ECOLI5.933e-1123.94Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECOL65.933e-1123.94Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECO575.933e-1123.94Stringent starvation protein A OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IaF_A05 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IaF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611030 ID=CB611030; Name=CB611030; organism=Citrus sinensis; type=EST; length=781bp
GGGGGTGTTTATCGTGTCTTTTCATATATTCACTGTTGATTCTTAGTAGC
TTCTGTAATAATGGCGGACGAAGTGATTCTGTTGGATTTCTGGCCCAGCA
TGTTCGGGATGAGGGTCAGGATTGCTCTGGCGGAGAAAGGCGTCAAGTAT
GAATACAAGGAAGAGGACTTGAAGAACAAGAGCCCCCTGCTTCTGCAGAT
GAACCCGGTTCACAAGAAGATCCCGGTTCTCATCCACAACGGCAGACCGG
TCTGTGAGTCATCCATCATTGTTCAGTACATTGATGAAGTGTGGAAGGAC
AAGGCTCCATTGCTTCCCTCTGATCGCTACCAGAGAGCTCAAGCTAGGTT
CTGGGTAGATTTCATTGACAAGAAGATGTATGATGCTTCGACGAAGGCAT
GGACCACAGAGGGAGAAGAGCAGGAGGCTGCTAAGAAGGAGTTCTTTGAA
GCTCTGAAGACCTTGGAAGGGCAGCTTGGAGACAAGCCTTTCTTCGGAGG
AGACAATTTTGGGTATTTGGATTTGAGTTTGATCCCATTCTATTACACAT
ATGAGACATTTGGAAAGTCCAGCATTGAGGCTGAGTGCCCCAAGTTCAAA
GCTTGGGTGAAGAGATGCTTGCAGAGGGAGACTATTGCCAAGGCACTTCC
TGATGAGAAGAAAGTGCTTGAACATGCTTCAGGGATGAGGAAAAATTTAG
TATTGGAGTAGAGAGAAAAAGGGACATATCTAGGAGCTGAGAATAGGTCA
AGTAGCGCAACCGTGCTGATTGCTTATTCTT
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