CB611035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.211e-33 Identity = 70/183 (38.25%), Postives = 115/183 (62.84%), Query Frame = 2 Query: 59 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 607 K + +++PEGV+V++ ++V GP+G+L R+F H + E GK+++ ++ +F +RK A + T +H++N+ITGVTKG+RYKM+ V +HFPI+ + +EI NF+GEK R ++L GVTV + ++I++G DIE V+++AA I Q + D R F+DGIY+ Sbjct: 3 KAVWVHALVDVPEGVEVEVEGSKVKVRGPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKVVG--DRVEIHNFIGEKAPRVAKVLPGVTVKVQGR---DVIIEGTDIEKVAQTAANIEQATKITEFDRRVFMDGIYI 179
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL9_HAECO (60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.389e-32 Identity = 64/131 (48.85%), Postives = 93/131 (70.99%), Query Frame = 2 Query: 56 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEM 448 MK + S++T++ P+GV + +++ V GPRG L R+F+HL+++ GK +L++ WFG RK AAIRT SH+QN+I GVTKG+RYKMR V+AHFPIN ++ + +++EIRNFLGEK VR V + Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEME-----RVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_DESK1 (50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl6p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30 Identity = 69/182 (37.91%), Postives = 112/182 (61.54%), Query Frame = 2 Query: 74 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKG 619 +E +EIPE V V+++ + V+GP+G ++R+F H F + D R + ++ + RK A + T +H++N+ITGV +GYRYK++ + +HFPI S+ +K + IRNF+GEK R ++ V V S +++I++G DIE V +AA I + V ++D R F+DGIY+ EKG Sbjct: 8 AEKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLED-----RVVIVETFVADRKQKALVGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIYGNVKVKVSG---EDIIIEGVDIEEVGLTAASIERATRVTDRDRRVFMDGIYIYEKG 181
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.508e-29 Identity = 69/181 (38.12%), Postives = 113/181 (62.43%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKG 619 E ++IPE V V+IN ++V GP+G + R+F H+ +++ E K + ++ +F R+ A + T SH++N+I GV KGYRYK++ +++HFPI + + ++ + I+NFLGEK R+ + G V + K +D +I++G DIE V ++AA I VK+KD R F DGIY+ + G Sbjct: 9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVR---NIILRKENSK--IIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKS-DRIAKIIGEDVKVTVKGED-IIVEGIDIEHVGQTAANIELATKVKDKDRRVFADGIYIYDWG 182
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_SULTO (50S ribosomal protein L6P OS=Sulfolobus tokodaii GN=rpl6p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.395e-29 Identity = 65/194 (33.51%), Postives = 114/194 (58.76%), Query Frame = 2 Query: 56 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTIVGE 634 MK + E +EIP+G+ V I I+V+GP+G++ ++F H++ + K+ ++ F R+ A + ++H++N+ TGVTKGYRY ++ ++ HFP+ ++ ++I+N +GEK +RR +++ GV V VK +++I++G DIE V ++AA I + D R F DGIY+ +K I E Sbjct: 1 MKAVHLYEEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHIS-----GIEIRKEDNKIVVETTFADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKVSG--NEVQIQNLIGEKNIRRAKIMTGVKV----NVKGEDIIVEGQDIEKVGQTAANIELASKITGYDRRVFADGIYIYKKEVIGSE 183
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_AERPE (50S ribosomal protein L6P OS=Aeropyrum pernix GN=rpl6p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27 Identity = 69/184 (37.50%), Postives = 112/184 (60.87%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTI 625 E +E+PEGV V I+ ++V GP+G++ R+F H + D + ++++F + A + H++N+I GV G+RYK++ +++HFPIN + DK I I NFLGEK +R ++ GV V +VK ++I++G D+E V+++AA I VK+KD RKF+DGIY+ E+ I Sbjct: 9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNS-----VVVESFFAKARQRALVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPINVKV-EGDKFI-ISNFLGEKGLRIARIMPGVKV----QVKGSDVIVEGIDVEKVAQTAANIELATKVKDKDRRKFMDGIYIYEREVI 181
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_PYRKO (50S ribosomal protein L6P OS=Pyrococcus kodakaraensis GN=rpl6p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.733e-27 Identity = 70/181 (38.67%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 616 E +EIPEGV+V + ++V+GP+G+L R K+ + T K+ I F +K A +RT +H+ N+I GVT+G++Y+++ V++HFP+ + + + I NFLGEK RR ++L GVTV KVK E+ ++G D E V ++AA I Q + D R F DGIY+ EK Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIF------TEDGKVVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV----KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_THEON (50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.793e-27 Identity = 70/180 (38.89%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 616 E +EIPEGV+V I +++V GP+G+L R K+ + T K+ I F +K A RT +H+ N+I GVT+G+ YK++ V++HFP+ + + + I NFLGEK RR ++L GVTV + E+I++G D E V ++AA I Q + D R F DGIY+ EK Sbjct: 9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIF------TEDGKVVIYKEFPRKKDIAIARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV---KVMGSEVIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_PYRAB (50S ribosomal protein L6P OS=Pyrococcus abyssi GN=rpl6p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.148e-26 Identity = 74/181 (40.88%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 616 E +EIPEGV+V + ++V+GP+G++ R + + E GK + D F RK A +RT +H+ N+I GVT+G+ YK++ V++HFPI + + IE NFLGEK RR ++L GVTV KVK E+I++G D E V ++AA I Q + D R F DGIY+ EK Sbjct: 9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFV----EGGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of CB611035 vs. ExPASy Swiss-Prot
Match: RL6_THEGJ (50S ribosomal protein L6P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl6p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.959e-26 Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 2 Query: 77 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRKLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVHAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEK 616 E +EIPEGV+V + +++V+GP+G+L R K+ + T K+ + F +K A RT +H+ N+I GVT+G+ YK++ V++HFP+ + + IE NFLGEK RR ++L GVTV KV+ E+ ++G D E V ++AA I Q + D R F DGIY+ EK Sbjct: 9 EEVEIPEGVEVTVENNVVKVKGPKGELERELKYPGVKIF------TEDGKVVVYKEFPRKKDIAIARTFKAHINNMIKGVTEGFTYKLKVVYSHFPVTVKVQGDEVIIE--NFLGEKNPRRAKILPGVTV----KVRGQEITVEGIDKEKVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177 The following BLAST results are available for this feature:
BLAST of CB611035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB611035 ID=CB611035; Name=CB611035; organism=Citrus sinensis; type=EST; length=849bpback to top |