CB611038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_META3 (30S ribosomal protein S9P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps9p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22 Identity = 61/139 (43.88%), Postives = 83/139 (59.71%), Query Frame = 2 Query: 101 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 511 V G++KTA+A K G+G I+IN PIE+VEP+ + K EPI+L G +G+D+ I V GGG Q+ A R ++ KA+V F E+KD V YDRT+L++D RR EP K +G RA+ QKSYR Sbjct: 4 VHTVGKRKTAIARATAKEGKGRIRINKKPIEIVEPKYINAKLMEPIILAG-DVVDGIDIDITVNGGGIVGQMDAARTALGKAIVEF-------TGDMELKDRFVHYDRTILISDARRTEPHKPSKSTKGPRAKRQKSYR 134
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_METMA (30S ribosomal protein S9P OS=Methanosarcina mazei GN=rps9p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 2 Query: 113 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 G+ KTA A +G G ++IN P+EL PE+ K EP+L+ G+ +G+D+ + V+GGG Q A+R ++A+ +V + + I+D YDR LLV+D R+ E K FGG GAR+++QKSYR Sbjct: 9 GKHKTATARATVMKGTGKVRINKIPLELYTPELAMMKISEPLLIAGKDVVSGLDINVDVRGGGIVGQANAVRTAVARGIVEW-------TNDTTIRDNFAAYDRNLLVSDSRQKEAKNFGGPGARSKYQKSYR 134
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_THESM (30S ribosomal protein S9P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps9p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 2 Query: 101 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARARFQKSYR 511 +Q G++K+AVA K G G +++N P+E++EPEI RF EP+++ G VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV D RR EP K +G RA+ QKSYR Sbjct: 12 IQTAGKRKSAVARATIKEGNGRVRVNYKPVEILEPEIARFTIMEPLVIAGEEILGKVDVDVKVEGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFMKYDRTMLVGDSRRTEPHKPNRSTKGPRAKRQKSYR 143
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_ARCFU (30S ribosomal protein S9P OS=Archaeoglobus fulgidus GN=rps9p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 2 Query: 113 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 G++KTA A K G+G ++IN P+E+ +PE+ R K EP L++ + VD+ ++ GGG +Q A R +IA+AL+ F +E++ + YDRTLLV D RR PK GGRGARAR Q SYR Sbjct: 11 GKRKTATARAVIKPGKGRVRINSVPVEIHQPELARMKIMEP-LIIAKELAEKVDIEVKTWGGGFMAQAEAARTAIARALLEF-------SGDEELRKAFLEYDRTLLVNDVRRKLPKIQGGRGARARRQTSYR 135
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_PICTO (30S ribosomal protein S9P OS=Picrophilus torridus GN=rps9p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.924e-21 Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 113 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 G++KTA+A ++G G ING PIEL EILR K EPI +LG R +D+ + V GGG+T Q A R ++AKA++ +++ D + EI+ YDR++LV D RR PKK G GARA+ QKSYR Sbjct: 9 GKRKTAIARAIIRKGSGKFLINGYPIELYPIEILREKMLEPIRILG-DRSKEIDIDVNVHGGGNTGQADATRTAMAKAIIEYFK---DSDLEAEIR----AYDRSMLVNDVRRKMPKKPMGYGARAKRQKSYR 133
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_PYRAE (30S ribosomal protein S9P OS=Pyrobaculum aerophilum GN=rps9p PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.431e-21 Identity = 58/133 (43.61%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 113 GRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 G+KKTAVA K G G ++ING P+EL E+ R K EP++L G VD+ + V GGG+ Q A+R ++A+ LVAF+Q +E+K++ RYD +L DPRR E KK G + AR++ QK+YR Sbjct: 18 GKKKTAVARAIIKPGIGRVRINGYPLELWPIEMARIKMSEPLILAG-ELAKKVDIDVNVSGGGYMGQAVAVRIAMARGLVAFFQ-------SQELKELYERYDPYMLKGDPRRTEHKKPGIKHARSKRQKAYR 142
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_SULTO (30S ribosomal protein S9P OS=Sulfolobus tokodaii GN=rps9p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.027e-18 Identity = 51/141 (36.17%), Postives = 81/141 (57.45%), Query Frame = 2 Query: 89 KTESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 +++ + + R+K A A Y G+G + +N P+E++ E++R K EP+LL G + +D +I V+GGG Q A R ++A+ALV F KE+++I YDRT+L DPR+ E +K+ AR QK+YR Sbjct: 4 QSQVIITYARRKMARARCYITPGKGRVFVNDIPLEIIPMEVVRMKIMEPLLLAGEKISSSIDAKIYVEGGGVMGQADAARMALARALVKF-------TGSKELEEIYKVYDRTMLAGDPRQTESEKWMRYSARRWRQKAYR 137
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_SULAC (30S ribosomal protein S9P OS=Sulfolobus acidocaldarius GN=rps9p PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.027e-18 Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 2 Query: 110 FGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 + R+K+A A Y K G G + +N PIE++ E++R+K EP++L G + ++ RI +GGG Q A R ++A+ALV F + KE+ +I YDRT+L DPR+ E +K+ AR QK+YR Sbjct: 12 YARRKSARASCYIKPGNGKVFVNDIPIEIIPIEVVRYKIMEPLVLAGDKITSSIEARIYTQGGGIMGQADAARMALARALVKF-------TNSKELVEIYKSYDRTMLAGDPRQTESEKWMRYSARRWRQKAYR 138
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_SULSO (30S ribosomal protein S9P OS=Sulfolobus solfataricus GN=rps9p PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 2.287e-18 Identity = 54/132 (40.91%), Postives = 74/132 (56.06%), Query Frame = 2 Query: 116 RKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 R+KTA A Y G+G + +N PIEL+ E++R K EP+LL G + +D +I GGG Q A R ++A+ALV F KE++ I YDRT+L DPR+ E +K+ AR QKSYR Sbjct: 13 RRKTARATCYIYAGKGRVFVNNVPIELIPIEMVRLKIMEPLLLAGNDIRSKIDAKIITYGGGIMGQADAARMALARALVKF-------TGSKELEKIYRAYDRTMLAGDPRQTESEKWMRYSARRWRQKSYR 137
BLAST of CB611038 vs. ExPASy Swiss-Prot
Match: RS9_CHLL2 (30S ribosomal protein S9 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=rpsI PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13 Identity = 53/140 (37.86%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 95 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIE-LVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 511 E + GR+KT+VA + G+G + IN P+E + E+ R KA P+ L R D+++ V+GGG T Q A+ IA+AL F DE + +K LL DPR E KKFG + AR RFQ S R Sbjct: 3 EVIDTVGRRKTSVARVFMTPGKGRVIINKLPVEEYFKDEVRRSKALRPLALT--ERTEEFDIKVNVQGGGITGQSGAVSLGIARALTEF-----DETVRPILKT------EKLLTRDPRMVERKKFGRKKARKRFQFSKR 129 The following BLAST results are available for this feature:
BLAST of CB611038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611038 ID=CB611038; Name=CB611038; organism=Citrus sinensis; type=EST; length=591bpback to top |