CB611076

Overview
NameCB611076
Unique NameCB611076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.291e-26
Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRIKECRSYPLY+ VREELG+ +LTGEKV SPGEEF+KVFTAM +G+IIDP+LECL  WNGA
Sbjct:  646 GNPAIPNRIKECRSYPLYKFVREELGTEYLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGA 713          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.291e-26
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRI ECRSYPLYR VR+ELG+  LTGEKV SPGEE DKVFTAMC G+IIDPMLECL+ WNGA
Sbjct:  643 GNPAIPNRITECRSYPLYRFVRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSWNGA 710          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.291e-26
Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRIKECRSYPLY+ +REELG+ +LTGEKVTSPGEEFDKVFTAM +G+IIDP+L CL  WNGA
Sbjct:  636 GNPAIPNRIKECRSYPLYKFIREELGTVYLTGEKVTSPGEEFDKVFTAMSKGEIIDPLLACLESWNGA 703          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.686e-26
Identity = 50/68 (73.53%), Postives = 62/68 (91.18%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+  +PNRIKECRSYPLY+ VREELG+  LTGEKV SPGEEFDKVFTA+C+G++IDP+++CL+EWNGA
Sbjct:  642 GNSAIPNRIKECRSYPLYKFVREELGTELLTGEKVRSPGEEFDKVFTALCKGEMIDPLMDCLKEWNGA 709          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.876e-26
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G   +PN+IKECRSYPLY+ VREELG+  LTGEKV SPGEE DK+FTAMCQGKIIDP+LEC+ EWNGA
Sbjct:  643 GQSAIPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGA 710          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.756e-26
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRI ECRSYPLYRLVR+E+G+  LTGEKV SPGEE DKVFTA C G+IIDP+LECL+ WNGA
Sbjct:  649 GNPAIPNRITECRSYPLYRLVRQEVGTELLTGEKVRSPGEEIDKVFTAFCNGQIIDPLLECLKSWNGA 716          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.756e-26
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P + NRIKECRSYPLYR VREELG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  640 GNPAIANRIKECRSYPLYRFVREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.906e-26
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRI ECRSYPLYRLVR+ELG+  LTGEKV SPGEE +KVFTAMC G+I DP+LECL+ WNGA
Sbjct:  648 GNPSIPNRITECRSYPLYRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGA 715          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.368e-26
Identity = 51/64 (79.69%), Postives = 59/64 (92.19%), Query Frame = 3
Query:   15 LPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            +PN+IK+CRSYPLY+ VREELG++ LTGEKV SPGEE DKVF+AMCQGKIIDP+LECL EWNGA
Sbjct:  644 IPNKIKDCRSYPLYKFVREELGTSLLTGEKVISPGEECDKVFSAMCQGKIIDPLLECLGEWNGA 707          
BLAST of CB611076 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.368e-26
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 3
Query:    3 GSPDLPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 206
            G+P +PNRI+ECRSYPLY+ VR+ELG  +LTGEKVTSPGEEFDKVF AM +G+IIDP+LECL  WNGA
Sbjct:  644 GNPAIPNRIEECRSYPLYKFVRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGA 711          
The following BLAST results are available for this feature:
BLAST of CB611076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PAL3_PETCR1.291e-2676.47Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL1_TOBAC1.291e-2677.94Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_DAUCA1.291e-2676.47Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_CAMSI1.686e-2673.53Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PALY_STYHU2.876e-2676.47Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL5_SOLLC3.756e-2675.00Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL3_TOBAC3.756e-2677.94Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL1_SOLTU4.906e-2675.00Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL2_PHAVU8.368e-2679.69Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL2_PETCR8.368e-2675.00Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_D07 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611076 ID=CB611076; Name=CB611076; organism=Citrus sinensis; type=EST; length=379bp
GGGGAAGTCCAGATCTTCCCAACAGGATCAAAGAATGCAGGTCTTACCCT
TTGTACAGGTTAGTGAGGGAGGAGCTCGGGTCTAATTTTCTAACAGGGGA
AAAAGTTACATCGCCCGGCGAGGAATTTGATAAAGTGTTTACAGCAATGT
GCCAGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAAT
GGCGCCCCTCTTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACACG
GTCTTCAATCCCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTC
AGTGGTACGAATTCATCTGTAATATTTCAATCACTTCTATTGGTTTTTTT
CAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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