CB611080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.454e-48 Identity = 86/188 (45.74%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSARE-ALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGY------GLKPAQPQ-GDTFFHALE--CEPTLQIGYQP 663 F M +TL+ Y +YG P + +E L S + EYLKLKAR E LQR+QRNLLGE+LG L ELE LE+QLD+SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++ L E Q++ A GY ++ P G+ FFH+LE EPTLQIG+ P Sbjct: 57 FCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRK-------------LEESNQLHGQVWEHGATLLGYERQSPHAVQQVPPHGGNGFFHSLEAAAEPTLQIGFTP 231 HSP 2 Score: 78.5666 bits (192), Expect = 1.454e-48 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKFC 134 QVTFAKRRNGLLKKAYELSVLCDAEVALIIF+NRGKL +FC Sbjct: 18 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC 58
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.394e-42 Identity = 80/198 (40.40%), Postives = 108/198 (54.55%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFH--ALECEPTLQIGYQPA--DPISVVTAGPSLNNY 711 F S M KTL+ Y +YG+ + + ++E E S Q EYLKLKA+ + LQRS RNLLGE+LG L++ ELE LE QLD SL+QIRS +TQ+MLD L +LQ KE++L E+N+ LK + L S QP GD FF L C LQIGY A D ++ T+ +++ + Sbjct: 57 FCSTSCMNKTLERYQRCSYGSLETSQPSKET-ESSYQ-EYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTK------------------------LEESCASFRPNWDVRQP-GDGFFEPLPLPCNNNLQIGYNEATQDQMNATTSAQNVHGF 227 HSP 2 Score: 78.1814 bits (191), Expect = 1.394e-42 Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKFC 134 QVTFAKRRNGLLKKAYELSVLCDAEVALI+F+NRGKL +FC Sbjct: 18 QVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFC 58
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.393e-41 Identity = 74/177 (41.81%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQ 660 F+ S M KTL+ Y + NY SA ELS +EYLKLK R E LQ +QRNLLGE+L PL+ ELE LE Q++ SL IRS++ Q +LD + EL+ KEQ L +ANK LK++ +Q G + L+ S +D G ++ + HA+ C+P+L IGYQ Sbjct: 57 FSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK-----------IQETSGENM----LHISCQDVGPSGHASEANQEFLHHAI-CDPSLHIGYQ 217 HSP 2 Score: 71.2478 bits (173), Expect = 7.393e-41 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTFAKRRNGLLKKAYELSVLCDAEVALIIF+ RG+L +F Sbjct: 18 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.393e-41 Identity = 74/177 (41.81%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQ 660 F+ S M KTL+ Y + NY SA ELS +EYLKLK R E LQ +QRNLLGE+L PL+ ELE LE Q++ SL IRS++ Q +LD + EL+ KEQ L +ANK LK++ +Q G + L+ S +D G ++ + HA+ C+P+L IGYQ Sbjct: 57 FSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRK-----------IQETSGENM----LHISCQDVGPSGHASEANQEFLHHAI-CDPSLHIGYQ 217 HSP 2 Score: 71.2478 bits (173), Expect = 7.393e-41 Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTFAKRRNGLLKKAYELSVLCDAEVALIIF+ RG+L +F Sbjct: 18 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 9.612e-41 Identity = 72/196 (36.73%), Postives = 108/196 (55.10%), Query Frame = 1 Query: 142 SRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQP--QGDTFFHALECEPTLQI----GYQPADPISVVTAGPSLNNY 711 S M +T+D Y +Y PN SA++ + ++YLKLK+R E LQ SQR+LLGEEL ++ ELE LERQ+D SL+QIRST+ + MLD L++L+ KE++L E N+ L+++ L +D A Q G Q + G + P Q FF L+ LQ+ + PA+ + T ++N + Sbjct: 62 SGMARTVDKYRKHSYATMDPNQSAKDLQDK--YQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRK---LEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNPANATNSATTSQNVNGF 252 HSP 2 Score: 77.411 bits (189), Expect = 9.612e-41 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKFC 134 QVTFAKRRNGLLKKAYELSVLCDAE+AL+IF+NRGKL +FC Sbjct: 18 QVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFC 58
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.315e-36 Identity = 68/192 (35.42%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 154 KTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGY------QPADPISVVTAGPSLNNY 711 KTL+ Y++ Y A N + S +E +LK + E LQRSQR++LGE+LGPL+ EL+ LE+QL+ SL Q R +TQ M++ + +L+ KE+ L E NK LK + + + + + T+ G + AQP D ++CEPTLQIGY + A+P S G NN+ Sbjct: 64 KTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEAEADSSNCRSAIQDSWVHGTVV-------SGGRVLNAQPPPD-----IDCEPTLQIGYYQFVRPEAANPRSNGGGGDQNNNF 243 HSP 2 Score: 72.0182 bits (175), Expect = 1.315e-36 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKAYELSVLCDAEVALIIF++RGKL +F Sbjct: 18 QVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.231e-36 Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGY 657 F+ S M KTL+ Y + NY + +A E++ Q EYLKLK R E LQ +QRN+LGE+LGPL+ ELE LE Q++ SLKQIRS + Q +LD L +L+ KEQ L + NK L+++ + + +G S +P QG H + + +LQIGY Sbjct: 57 FSSSSCMYKTLERYRSCNYNSQD---AAAPENEINYQ-EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGG-------GHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221 HSP 2 Score: 70.0922 bits (170), Expect = 2.231e-36 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTFAKRRNGLLKKAYELS+LCDAEVALIIF+ RG+L +F Sbjct: 18 QVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.231e-36 Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGY 657 F+ S M KTL+ Y + NY + +A E++ Q EYLKLK R E LQ +QRN+LGE+LGPL+ ELE LE Q++ SLKQIRS + Q +LD L +L+ KEQ L + NK L+++ + + +G S +P QG H + + +LQIGY Sbjct: 57 FSSSSCMYKTLERYRSCNYNSQD---AAAPENEINYQ-EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGG-------GHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221 HSP 2 Score: 70.0922 bits (170), Expect = 2.231e-36 Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTFAKRRNGLLKKAYELS+LCDAEVALIIF+ RG+L +F Sbjct: 18 QVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.421e-35 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 F+ S MLKTL+ Y Y + + ++ + Q EY+ LKA E LQ+SQRNLLGE+L PL + ELE LE Q+ +LKQIRS +TQ +LD L +L+ KEQ+L +AN+ LK++ Sbjct: 57 FSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQ-EYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRK 171 HSP 2 Score: 68.1662 bits (165), Expect = 1.421e-35 Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTFAKRRNGLLKKAYELS+LCDAEVAL++F++ G+L +F Sbjct: 18 QVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 5.326e-35 Identity = 66/170 (38.82%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 154 KTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVN--TLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGY 657 KTL+ Y + Y A N + E S E KLKA++EALQR+QR+LLGE+LGPL+ EL+ LE+QL+ +L Q R +TQ M++ + EL+ KE+ L E N+ LK + +EG N +Q A+ A Q A++ EPTLQIGY Sbjct: 64 KTLERYQHCCYNAQDSNNALSETQ--SWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLE------------VEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHSAAMDSEPTLQIGY 219 HSP 2 Score: 72.0182 bits (175), Expect = 5.326e-35 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKAYELSVLCDAEVALIIF++RGKL +F Sbjct: 18 QVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57 The following BLAST results are available for this feature:
BLAST of CB611080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611080 ID=CB611080; Name=CB611080; organism=Citrus sinensis; type=EST; length=711bpback to top |