CB611080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 5.129e-32 Identity = 60/170 (35.29%), Postives = 95/170 (55.88%), Query Frame = 1 Query: 157 TLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALEC--EPTLQIGYQ 660 T++ Y N Y N E + Q E KLK++YE+L R+ RNLLGE+LG + EL++LERQL+ +L R +TQ M++ + +L+ KE+ L + NK LK + T HA F Q + ++ +P+ + + ++P+ P + L+C EP LQIG+Q Sbjct: 65 TIERY-NRCYNCSLSNNKPEETTQSWCQ-EVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHA-FKTFQDLWANSAASVAGDPNNSE--FPVEPSHP------NVLDCNTEPFLQIGFQ 223 HSP 2 Score: 72.0182 bits (175), Expect = 5.129e-32 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKAYELSVLCDAEVALIIF++RGKL +F Sbjct: 18 QVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.069e-30 Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 693 +A S M K L+ Y +Y A + +SA + + EY KLKA+ E +Q+ Q++L+GE+L LN EL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ +L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 57 YATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQK-------------ELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227 HSP 2 Score: 64.6994 bits (156), Expect = 2.069e-30 Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA E+SVLCDAEVALIIF+ +GKL K+ Sbjct: 18 QVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.503e-30 Identity = 55/146 (37.67%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAE 567 +A SRM K L+ Y +Y A + +SA E + EY KLKA+ E +Q+ ++L+GE+L LN EL+ LE+QL++SLK I S ++ ML++++ELQ KE+ L E NK L Q+ + R + G Q + + +Q A+ Sbjct: 57 YATDSRMDKILERYERYSY-AEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKAL-QKELVERQKNVRGQQQVGQWDQTQVQAQAQAQ 200 HSP 2 Score: 63.5438 bits (153), Expect = 3.503e-30 Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+E+SVLCDAEVA I+F+ +GKL ++ Sbjct: 18 QVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 5.949e-30 Identity = 66/191 (34.55%), Postives = 98/191 (51.31%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPTLQIGYQPA---DPISVVTAG 693 +A S M K L+ Y +Y A + +SA + + EY KLKA+ E +Q+ Q++L+GE+L LN EL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ +L+E +V Q+ +P + F E PT I PA + I V AG Sbjct: 57 YATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQK-------------ELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227 HSP 2 Score: 63.1586 bits (152), Expect = 5.949e-30 Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA E+SVLCDAEVALIIF+ +GKL ++ Sbjct: 18 QVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.772e-29 Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLR 492 ++ S M K L+ Y +Y A + ++ + + EY +LKA+ E L+R+QR+ LGE+L ++S EL++LE+QLDT+LK IRS + Q M D++ ELQ KE+ + E N K +K+R LR Sbjct: 57 YSTDSCMEKILERYERYSY-AERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILR 180 HSP 2 Score: 62.7734 bits (151), Expect = 3.772e-29 Identity = 28/40 (70.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GLLKKA+E+SVLCDAEVAL++F+++GKL ++ Sbjct: 18 QVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 1.411e-28 Identity = 68/197 (34.52%), Postives = 99/197 (50.25%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYG-----APQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFH------ALECEPTLQIG--YQPAD 669 ++ S M K L+ Y +Y AP +V+A+ + EY +LKA+ E L+R+QR+ LGEEL P++ +L++LE+QL+T+LK IRS + Q M ++L LQ KE+ + E N K +K+R LR Q QLN S +D PQ F H A + P L +G YQ D Sbjct: 57 YSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSM----EYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTK-----------QTQCEQLNRSVDDV--------PQPQPFQHPHLYMIAHQTSPFLNMGGLYQEED 230 HSP 2 Score: 61.6178 bits (148), Expect = 1.411e-28 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GLLKKA E+SVLCDAEV+LI+F+++GKL ++ Sbjct: 18 QVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.869e-28 Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLR 492 ++ S M K L+ Y +Y A + ++ + + EY +LKA+ E L+R+QR+ LGE+L ++ EL++LE+QLDT+LK IR+ + Q M +++ ELQ KE+ + E N K +K+R LR Sbjct: 57 YSTDSCMEKILERYERYSY-AERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR 180 HSP 2 Score: 62.7734 bits (151), Expect = 6.869e-28 Identity = 28/40 (70.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GLLKKA+E+SVLCDAEVAL++F+++GKL ++ Sbjct: 18 QVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.120e-26 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNY---GAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 474 F+ S M L+ Y ++ +PN +E + EY LK++ +ALQ+SQR LLGE+L L EL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ Sbjct: 57 FSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 170 HSP 2 Score: 66.2402 bits (160), Expect = 2.120e-26 Identity = 30/40 (75.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+E+SVLCDA+VALI+F+ +GKL +F Sbjct: 18 QVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.120e-26 Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNY---GAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 474 F+ S M L+ Y ++ +PN +E + EY LK++ +ALQ+SQR LLGE+L L EL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L N L++ Sbjct: 57 FSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQK 170 HSP 2 Score: 66.2402 bits (160), Expect = 2.120e-26 Identity = 30/40 (75.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+E+SVLCDA+VALI+F+ +GKL +F Sbjct: 18 QVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEF 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 4.676e-26 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 235 IQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQ 516 +++E KLK +YE+L R+ RNL+GE+L ++ EL++LERQL+ +L R +TQ M++ + EL+ KE+ L + N LK T DF G Q Sbjct: 88 LRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLET---EDHDFKGFQ 178 HSP 2 Score: 64.6994 bits (156), Expect = 4.676e-26 Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KR++GLLKKAYELSVLCDAEV+LIIF+ GKL +F Sbjct: 18 QVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF 57 The following BLAST results are available for this feature:
BLAST of CB611080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611080 ID=CB611080; Name=CB611080; organism=Citrus sinensis; type=EST; length=711bpback to top |