CB611080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.924e-26 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 145 RMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 R+L+ D Y + +VS E L E+ KLKAR E L++++RN +GE+L L+ EL+SLE QLD ++K IRS + Q M ++++ LQ K++ L + N +L ++ Sbjct: 65 RILERYDRYLYSDKQLVGRDVSQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKK 171 HSP 2 Score: 64.3142 bits (155), Expect = 7.924e-26 Identity = 29/40 (72.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA+E+SVLCDAEVALI+F+++GKL ++ Sbjct: 18 QVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.936e-26 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 +A S M + L+ Y ++ Q V +S E+ KLKAR E LQR+Q++ +GE+L L+ EL++LE QLD++LK IRS + Q M ++++ LQ K++ L E N L ++ Sbjct: 57 YANDSCMERILERYERYSFAEKQL-VPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKK 171 HSP 2 Score: 62.3882 bits (150), Expect = 7.936e-26 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA+E+SVLCDAEV LI+F+ +GKL ++ Sbjct: 18 QVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.746e-25 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 +A S M + L+ Y ++ A + V S E+ KLKAR E LQR+Q++ +GE+L LN EL++LE QLD++LK IRS + Q M ++++ LQ +++ L E N L ++ Sbjct: 57 YANDSCMERLLERYERYSF-AERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKK 171 HSP 2 Score: 62.3882 bits (150), Expect = 1.746e-25 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA+E+SVLCDAEV LI+F+ +GKL ++ Sbjct: 18 QVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.960e-25 Identity = 37/95 (38.95%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 244 EYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEAN----KTLKQRTMTLRHADFAGLQ 516 E+ KLKAR E L++++RN +GE+L L+ EL+SLE QL ++K IRS + Q M ++++ LQ K+++L + N K +K+R H + +Q Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQ 188 HSP 2 Score: 64.3142 bits (155), Expect = 2.960e-25 Identity = 29/40 (72.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA+E+SVLCDAEVAL+IF+++GKL ++ Sbjct: 18 QVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.606e-23 Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 +A S M + L+ Y ++ Q V S E KLKAR E LQR+++ +GE+L LN EL++LE QL ++LK IRS + Q M ++++ LQ +++ L E N L ++ Sbjct: 57 YATDSCMERLLERYERYSFAEKQL-VPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKK 171 HSP 2 Score: 62.3882 bits (150), Expect = 2.606e-23 Identity = 28/40 (70.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA+E+SVLCDAEV LI+F+ +GKL ++ Sbjct: 18 QVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.386e-23 Identity = 30/40 (75.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYEL++LCDAE+ALI+F++RG+L +F Sbjct: 18 QVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEF 57 HSP 2 Score: 59.6918 bits (143), Expect = 3.386e-23 Identity = 42/154 (27.27%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDTFFHALECEPT---LQIGYQPADPISVVTA 690 Q+E K++ + + LQ + R+L+GE +G + + EL+SLE +L+ + +IRS + + + + +Q +E L N L+ + A+ Q +AED PA G + LE P + YQPA P+S++ A Sbjct: 93 QQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQQ--------------AAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAA 232
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.735e-22 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+ELSVLCDAEV+LIIF+ +GKL +F Sbjct: 18 QVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEF 57 HSP 2 Score: 56.9954 bits (136), Expect = 4.735e-22 Identity = 36/115 (31.30%), Postives = 63/115 (54.78%), Query Frame = 1 Query: 142 SRMLKTLDXYHNGNYGAPQPNVSAREALELSIQK---EYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 S M T+D Y + VS + E ++Q E + + E L+ S+R LLGE +G + EL+ +E+QL+ S+K IR+ +TQ + + +L+ KE+ L+ N+ L ++ Sbjct: 60 SNMQDTIDRYLRHT----KDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEK 170
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.041e-21 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVALI+F+ RG+L ++ Sbjct: 18 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY 57 HSP 2 Score: 54.299 bits (129), Expect = 1.041e-21 Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQ 549 Q+E KL+ + + +Q S RNL+G+ L L+ EL+ +E +L+ ++ +IRS + + +L + Q +E L N L+ + + Q++ G ++N ++ Sbjct: 91 QQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQHHHQMVSGSEINAIE 194
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.758e-21 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVAL+IF+ RG+L ++ Sbjct: 33 QVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY 72 HSP 2 Score: 53.5286 bits (127), Expect = 1.758e-21 Identity = 32/107 (29.91%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 157 TLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 T++ Y A P S EA Q+E KL+ + +Q S R+++GE LG LN EL++LE +L+ + ++RS + + ++ + +Q +E L N L+ + Sbjct: 80 TIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAK 185
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.289e-21 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVALI+F+ RG+L ++ Sbjct: 34 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY 73 HSP 2 Score: 53.1434 bits (126), Expect = 2.289e-21 Identity = 31/107 (28.97%), Postives = 57/107 (53.27%), Query Frame = 1 Query: 157 TLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 T++ Y +P + S EA Q+E KL+ ++Q++ RN++GE LG L +L+ LE +L+ + +IRS + + + + +Q KE L N+ L+ + Sbjct: 81 TIERYKKACTDSPNTS-SVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAK 186 The following BLAST results are available for this feature:
BLAST of CB611080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611080 ID=CB611080; Name=CB611080; organism=Citrus sinensis; type=EST; length=711bpback to top |