CB611080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.291e-21 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+ELSVLCDAEVALI+F+ RG+L +F Sbjct: 18 QVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEF 57 HSP 2 Score: 53.9138 bits (128), Expect = 2.291e-21 Identity = 37/123 (30.08%), Postives = 61/123 (49.59%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHA 498 FA + KT+D Y Y N + ++ + L L + EAL S+R +LGE L + EL LE +L+ SL +IR +T+ + + +L+ KE+ L + N+ L+ + L A Sbjct: 57 FASAPSLQKTIDRYKA--YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAA 177
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.871e-21 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVALI+F++RG+L ++ Sbjct: 34 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 73 HSP 2 Score: 51.9878 bits (123), Expect = 3.871e-21 Identity = 38/135 (28.15%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 208 SAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDT 612 S EA Q+E KL+A+ LQ RN+LGE L L+ +L++LE++++ + +IRS + + + + +Q +E L N+ L+ + A Q Q+N Y L P Q DT Sbjct: 97 SISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQ---------QQQQQQQMNLMPGSSSYELVPPPHQFDT 222
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.552e-21 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVAL++F+NRG+L ++ Sbjct: 34 QVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEY 73 HSP 2 Score: 49.6766 bits (117), Expect = 6.552e-21 Identity = 35/135 (25.93%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 208 SAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDT 612 S EA Q+E KL+A+ L RN++GE L + EL++LE++++ + +IRS + + + + +Q +E L N+ L+ + A +Q + L P + + L P Q DT Sbjct: 97 SVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQ---------HQHQQMNLMPGSSSNYHELVPPPQQFDT 222
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.563e-21 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA+ELSVLCDAEVALI+F+ RG+L +F Sbjct: 18 QVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEF 57 HSP 2 Score: 52.373 bits (124), Expect = 6.563e-21 Identity = 37/123 (30.08%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 130 FAXRSRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHA 498 FA + KT+D Y Y N + ++ + L L + EAL S+R +LGE L + EL LE +L+ SL IR +T+ + + +L+ KE+ L + N+ L+ + L A Sbjct: 57 FASAPSLQKTIDRYKA--YTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGKHRNLEAA 177
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.520e-21 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVALI+F++RG+L ++ Sbjct: 34 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 73 HSP 2 Score: 50.8322 bits (120), Expect = 8.520e-21 Identity = 26/80 (32.50%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 Q+E KL+ + ++Q S R L+GE +G ++ EL +LE +LD S+ +IRS + + + + +Q +E L N+ L+ + Sbjct: 107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAK 186
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.442e-20 Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVALI+F++RG+L ++ Sbjct: 34 QVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 73 HSP 2 Score: 50.0618 bits (118), Expect = 1.442e-20 Identity = 25/80 (31.25%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 Q+E KL+ + ++Q S R L+GE +G ++ EL +LE +L+ S+ +IRS + + + + +Q +E L N+ L+ + Sbjct: 107 QQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAK 186
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.441e-20 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF KRRNGLLKKAYELSVLCDAEVAL+IF+ RG+L ++ Sbjct: 33 QVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY 72 HSP 2 Score: 49.6766 bits (117), Expect = 2.441e-20 Identity = 31/107 (28.97%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 157 TLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 T++ Y A P + EA Q+E KL+ + +Q R++LGE LG LN EL++LE +L+ + ++RS + + ++ + +Q +E L N L+ + Sbjct: 80 TIERYKKACSDAVNPP-TITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSK 185
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 5.375e-20 Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLR 492 Q+E L+ + LQ + R L+GE+L LN EL+SLE QL+ SL+ +R+ + ++D + EL K L+ + N L ++ +R Sbjct: 90 QREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIR 174 HSP 2 Score: 57.3806 bits (137), Expect = 5.375e-20 Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNG+ KKA EL++LCDAEV L+IF++ G+L ++ Sbjct: 18 QVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEY 57
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 5.379e-20 Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 223 LELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHK 435 LE S+ +++KL+ R EAL++SQRNL+G+EL L +++ LE Q+DTSL IRS + + +++ T L+ K Sbjct: 90 LEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160 HSP 2 Score: 53.9138 bits (128), Expect = 5.379e-20 Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKL 122 QVTF+KRR GLLKKA+E++VLCD +VA I+F+ +G L Sbjct: 18 QVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNL 54
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.389e-19 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKFCXXIKN 149 QVTF+KRR GL KKA ELSVLCDA+VALI+F++ GKL+ F N Sbjct: 18 QVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMN 63 HSP 2 Score: 52.7582 bits (125), Expect = 3.389e-19 Identity = 37/124 (29.84%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 142 SRMLKTLDXY--HNGNYG-APQPNVSAREALELSIQ-KEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAD 501 S M + +D Y H+ N G A QP+ L+L+++ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L+ + + A+ Sbjct: 60 SSMNEIIDKYNTHSNNLGKAEQPS------LDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAE 177 The following BLAST results are available for this feature:
BLAST of CB611080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611080 ID=CB611080; Name=CB611080; organism=Citrus sinensis; type=EST; length=711bpback to top |