CB611080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 3.389e-19 Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GL+KKA EL++LCDAEV LIIF++ GKL F Sbjct: 18 QVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF 57 HSP 2 Score: 55.0694 bits (131), Expect = 3.389e-19 Identity = 33/102 (32.35%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQLMEGYQVNT 543 Q+E L+ ALQ + R ++GE+L L+ EL SLE Q++ SL+ IR + Q + + EL K L+ + N L ++ + H + L + Y NT Sbjct: 90 QREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRI-HQENVEL-YKKAYMANT 189
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 7.447e-19 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GLLKKA+ELSVLCDAE+ LIIF++ GKL ++ Sbjct: 18 QVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEY 57 HSP 2 Score: 51.9878 bits (123), Expect = 7.447e-19 Identity = 31/91 (34.07%), Postives = 51/91 (56.04%), Query Frame = 1 Query: 244 EYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGLQ 516 E ++K E LQ + R ++GE+L L EL L +QL+++ ++RS + Q ML L L+ KE++L + N L R + + A G+Q Sbjct: 90 EMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHL-CRLLAEQQAAVEGVQ 179
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.129e-18 Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKFC 134 QVTF+KRR GL KKA ELSVLCDA+VALIIF++ GKL +FC Sbjct: 18 QVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFC 58 HSP 2 Score: 47.3654 bits (111), Expect = 2.129e-18 Identity = 28/100 (28.00%), Postives = 52/100 (52.00%), Query Frame = 1 Query: 223 LELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR-TMTLRHADFAGLQL 519 L+L ++ ++ R + GEEL L+ EL+ LE+ L+T L ++ T++ ++ ++ELQ K L + NK L+Q+ T + G+Q+ Sbjct: 86 LQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENERLGMQI 185
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 2.759e-18 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GLLKKA ELSVLCDAEVA+I+F+ GKL ++ Sbjct: 18 QVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEY 57 HSP 2 Score: 50.447 bits (119), Expect = 2.759e-18 Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = 1 Query: 148 MLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLR 492 M +TL Y GN+ + + + + E+ I K+ L LQ L G+ L PL EL+SLE+QL +L +R + + + + L E + KEQ N+TL+++ LR Sbjct: 62 MKQTLSRY--GNHQSSSASKAEEDCAEVDILKDQLS------KLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENETLRRQVQELR 168
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 2.767e-18 Identity = 28/40 (70.00%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRRNGLLKKA ELS+LCDAEV L++F++ G+L +F Sbjct: 18 QVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEF 57 HSP 2 Score: 48.9062 bits (115), Expect = 2.767e-18 Identity = 33/112 (29.46%), Postives = 54/112 (48.21%), Query Frame = 1 Query: 142 SRMLKTLDXYHNGNYGAPQPNVSAREALELSI-QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 474 + M +D Y N A + + E+ I Q+E L+ + LQ S + L+GEEL L +L+ LE +L+ SL+ IR + + + EL K L+ + N L + Sbjct: 60 TNMKTVIDRYTN----AKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSR 167
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.735e-17 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GLLKKA+ELSVLCDAEVA+I+F+ GKL +F Sbjct: 18 QVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEF 57 HSP 2 Score: 46.2098 bits (108), Expect = 1.735e-17 Identity = 34/120 (28.33%), Postives = 58/120 (48.33%), Query Frame = 1 Query: 148 MLKTLDXYHNGNYGAPQPNVSAR-----EALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLR 492 M KTL Y N + P ++ + E E+ + K+ + + LQ ++ G+ L L+ EL+ LE+QL+ SL +R + + L E + KEQ N+TL+++ LR Sbjct: 62 MKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISM------LQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETLRRQVQELR 175
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.254e-17 Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKL 122 QVTF+KRR GL KKA ELSVLCDA+VALIIF++ GKL Sbjct: 18 QVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKL 54 HSP 2 Score: 48.9062 bits (115), Expect = 2.254e-17 Identity = 28/89 (31.46%), Postives = 44/89 (49.44%), Query Frame = 1 Query: 223 LELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTL 489 L+L Y +L R + GEEL LN EL+ LER L+T L ++ + ++ + +LQ K L E N+ L+Q+ M + Sbjct: 86 LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEI 174
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 4.997e-17 Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNK 128 QVTF KRR GLLKKA ELSVLCDA+V +IIF+++GKL++ Sbjct: 18 QVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHE 56 HSP 2 Score: 47.7506 bits (112), Expect = 4.997e-17 Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 172 HNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 477 + N Q A + +++ Q +L L+ + LQR R+ G G + +L +LE+ L+ + QIR+T+ Q M + L++KE +L EAN+ L+++ Sbjct: 70 YQSNVAGGQMEPGALQRQQVAEQGIFL-LREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEK 170
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 1.848e-16 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR GL+KKA EL++LCDA+V LI+F+ G+L F Sbjct: 18 QVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDF 57 HSP 2 Score: 50.0618 bits (118), Expect = 1.848e-16 Identity = 32/120 (26.67%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 238 QKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHADFAGL--QLMEGYQVNTLQLNPSAEDCGYGLKP 591 Q+E L+ + + L + R LLGEE+ +L+ L+ Q++ SL IR+ + Q + + + +L K L+ + N L+++ + H L +L G ++ Q+ S++D G P Sbjct: 90 QREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSELRKK-FNIAHQRNIELHKKLNSGESTSSEQVTRSSKDPGESSTP 208
BLAST of CB611080 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.439e-16 Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 3 Query: 12 QVTFAKRRNGLLKKAYELSVLCDAEVALIIFANRGKLNKF 131 QVTF+KRR+GL KKA ELS+LCDAEV L++F++ +L F Sbjct: 18 QVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDF 57 HSP 2 Score: 49.2914 bits (116), Expect = 2.439e-16 Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 1 Query: 142 SRMLKTLDXYHNGNYGAPQPNVSAREALELSIQKEYLKLKARYEALQRSQRNLLGEELGPLNS*ELESLERQLDTSLKQIRSTRTQYMLDTLTELQHK 435 S +K++ +N P ++A +L Q+E L+ + LQ R LLG++L L+ +L++LE +L+ SLK IR + M+D + EL K Sbjct: 59 SSSMKSIIERYNETKEDPHQTMNASSEAKLW-QQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155 The following BLAST results are available for this feature:
BLAST of CB611080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611080 ID=CB611080; Name=CB611080; organism=Citrus sinensis; type=EST; length=711bpback to top |