CB611084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_PYRAE (30S ribosomal protein S2P OS=Pyrobaculum aerophilum GN=rps2p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27 Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 135 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 ++ L+A V LGT+ + +E ++F R DG+ I ++ K E+L++AA+ I A P ++V + RPYG + V F K+ A+ GR PGT TN + E LL + DP+ D Q + EAA IP IA DTD+P +Y+D IP NNKG+ + +FW+L Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEDRGFIFAVRPDGLRIFDIKKIDERLKIAAKFI-ARYRPERVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGTLTNPNLPHYQEVDLLFVVDPKLDAQAVAEAAKMGIPVIALVDTDTPHQYIDFMIPCNNKGRKSLALIFWIL 177
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_META3 (30S ribosomal protein S2P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps2p PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.505e-26 Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 147 LAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LA+ +H+GT+ M+R++++ R DG+Y++++ KT E++ +AA+ + E P +I+ S R Y + KF + T AGR PGT TN F EP +L L+DPR D Q +KEA IP + CDT+ ++D IP NNKG+ + +++L+ Sbjct: 14 LASGIHIGTQQKTEDMKRFIYRVRADGLYVLDVRKTDERIGLAAKFLSKYE-PEEILAVSRRIYSVGPLKKFGQTTGITTAAGRFVPGTLTNPSSRKFLEPEVLFLSDPRIDRQALKEAIEIGIPIVGMCDTEHLTSFIDFIIPTNNKGRKSVSLVYYLI 172
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_ENCCU (40S ribosomal protein S0 OS=Encephalitozoon cuniculi GN=RPS0 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26 Identity = 63/165 (38.18%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 135 IQMMLAAEVHLGTKNCDFQMERYVFKRR-NDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 +++++ ++ HLG + + RY++ R D I II++ TWEKL +AAR I++P I V S + +G++ V+KF + A I GR PG+FTN +PR+LI++D D Q I E+ N+PTIAF +TD+ + VDI IP NN+ I F++L Sbjct: 19 VKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARAFCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFIL 183
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_PYRCJ (30S ribosomal protein S2P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps2p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.965e-26 Identity = 62/166 (37.35%), Postives = 98/166 (59.04%), Query Frame = 3 Query: 135 IQMMLAAEVHLGTKNCDFQMER--YVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 ++ L+A V LGT+ + +E +++ R DG+ I ++ K E+L++AA++I P ++V + RPYG + V F K+ A+ GR PG TN +++ E LL + DPR D Q + EAA IP +A DTD+P +Y+D IP NNKG+ + +FW+L Sbjct: 13 LEKYLSAGVRLGTRLSNKYLEERGFIYAVRPDGLRIFDIKKIDERLRIAAKLIARYP-PDRVLVHTTRPYGFKPVQMFCKFVGCKALTGRFIPGMLTNPNLSNYLEVDLLFVVDPRLDSQAVAEAAKMGIPVVALVDTDTPHQYIDFMIPCNNKGRKSLALIFWVL 177
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_KORCO (30S ribosomal protein S2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps2p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.274e-25 Identity = 61/163 (37.42%), Postives = 95/163 (58.28%), Query Frame = 3 Query: 138 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 Q L + VH+GT ME+++++ R DG+ II++ K E+++ A + + + P ++ SAR YG + V KFA+YT A I GR PGT TN EP +++L+DPR D Q E+ IP +A D D+ + +D+ IP NNKG+ + ++WLL Sbjct: 24 QKYLLSGVHVGTGIRTKDMEKFIYRVRPDGLCIIDIRKIDERIRTAGKFLARFD-PDRVLAVSARIYGFKPVRKFAEYTGAMYITGRILPGTLTNPQAPLHLEPDVVLLSDPRVDRQIHIESVRMGIPVVALVDADNMLENIDLAIPVNNKGRRSLALVYWLL 185
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_NANEQ (30S ribosomal protein S2P OS=Nanoarchaeum equitans GN=rps2p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 55/164 (33.54%), Postives = 93/164 (56.71%), Query Frame = 3 Query: 135 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 I + + A +H+GT++ M+ YV K R DG+ I ++ K E+L++A++++ E P +I+V R + KF++ T A GR+ PGT TN + EP ++++TDP D + +A I +A CDT+ Y+D IPANN+G + ++W+L Sbjct: 7 INVYVKAGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWIL 169
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_AERPE (30S ribosomal protein S2P OS=Aeropyrum pernix GN=rps2p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 153 AEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 A V GT+ C M ++V + +G Y ++ K E+L MAA+ + E P I V S R YGQ+ V + AI GR PGTFTN + EP ++++TDPR D Q + EA+ IP +A DTD+ + +D+ IPANN+G+ + ++W+L Sbjct: 18 AGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVRIYGQKPVRMMCERVGCKAITGRIIPGTFTNPNLEHYVEPDVVVVTDPRMDRQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRRSLALIYWIL 174
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_NITMS (30S ribosomal protein S2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps2p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21 Identity = 54/163 (33.13%), Postives = 94/163 (57.67%), Query Frame = 3 Query: 144 MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI--VAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 +L+ + +GT+ M ++ K +G+Y+++L T +K++ AA+ I + +EN +IV S R Y + + KF + + + GR PGT TN + EP+L++++DP+ D Q I EA IP I +TD+ +D+ IPANN+G+ + ++WLL Sbjct: 14 ILSTGIRVGTQVKTKFMRPFITKASPEGLYMLDLDITLDKIKTAAKFINRLGVEN---LIVCSGRQYAETPIEKFCETLGSKKLLGRFMPGTLTNPSLPYYIEPKLVLISDPQVDEQAITEATNAGIPVIGIANTDNITSNLDVIIPANNRGRKALATVYWLL 173
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RS2_CENSY (30S ribosomal protein S2P OS=Cenarchaeum symbiosum GN=rps2p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16 Identity = 50/164 (30.49%), Postives = 88/164 (53.66%), Query Frame = 3 Query: 141 MMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG--DIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 ++ + + +GT+ M++++ G Y ++L T +++ AA+ I E+ G ++IV S + + + KFA+ I R PGT TN + EP+LL++ DP+ D Q + EA IP I ++D+ +D+ IPANN+G+ + +FWLL Sbjct: 15 LITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEATQGRIKAAAQFI---EHTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLL 175 The following BLAST results are available for this feature:
BLAST of CB611084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611084 ID=CB611084; Name=CB611084; organism=Citrus sinensis; type=EST; length=626bpback to top |