CB611084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROPS (40S ribosomal protein SA OS=Drosophila pseudoobscura pseudoobscura GN=sta PE=3 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.303e-62 Identity = 116/171 (67.84%), Postives = 135/171 (78.95%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROPE (40S ribosomal protein SA OS=Drosophila persimilis GN=sta PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.303e-62 Identity = 116/171 (67.84%), Postives = 135/171 (78.95%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROAN (40S ribosomal protein SA OS=Drosophila ananassae GN=sta PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.222e-62 Identity = 115/171 (67.25%), Postives = 135/171 (78.95%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKLQ+AAR IVAI+N D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLQLAARAIVAIDNASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_LACBS (40S ribosomal protein S0 OS=Laccaria bicolor (strain S238N-H82) GN=RPS0 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62 Identity = 111/174 (63.79%), Postives = 139/174 (79.89%), Query Frame = 3 Query: 105 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 P L+ E +IQ++LAA+ H+GTKNCD QME YV+KRR DGI+I+N+GKTWEKL +AARVI A+ENP D+ V SARPYG RAVLK+A T A AIAGR TPG+FTN + SF EPRL+I+TDPR DHQ I+EA+ NIP IA CDTD+P+++VD+ IP NNK +H IG ++WLL Sbjct: 6 PSVLAATEEEIQLLLAAQCHIGTKNCDKQMEPYVWKRRADGIHILNIGKTWEKLVLAARVIAAVENPNDVCVISARPYGHRAVLKYAANTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRVDHQAIREASYVNIPVIALCDTDAPLKFVDVAIPTNNKTRHSIGLIWWLL 179
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROVI (40S ribosomal protein SA OS=Drosophila virilis GN=sta PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62 Identity = 116/171 (67.84%), Postives = 134/171 (78.36%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROMO (40S ribosomal protein SA OS=Drosophila mojavensis GN=sta PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62 Identity = 116/171 (67.84%), Postives = 134/171 (78.36%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROGR (40S ribosomal protein SA OS=Drosophila grimshawi GN=sta PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62 Identity = 116/171 (67.84%), Postives = 134/171 (78.36%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YVFKRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVFKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_PINFU (40S ribosomal protein SA OS=Pinctada fucata PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 6.466e-62 Identity = 112/171 (65.50%), Postives = 132/171 (77.19%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 L+ KE DI LA HLG N DFQME+YV+KR+ DG+YIINL +TWEKL +AAR I AIENP D+ V SARPYGQRAVLKFA T A IAGR TPGTFTNQ+Q +F EPRLL++TDPR DHQP+ EA+ NIP IA C+TDSP+RYVD+ IP NNK H +G ++WLL Sbjct: 8 LALKEEDITKFLACSTHLGATNVDFQMEQYVYKRKPDGVYIINLRRTWEKLLLAARAIAAIENPADVCVISARPYGQRAVLKFASATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRIDHQPVTEASYVNIPVIALCNTDSPLRYVDVAIPCNNKSVHSVGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_TRIGR (40S ribosomal protein SA OS=Tripneustes gratilla PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 8.445e-62 Identity = 110/171 (64.33%), Postives = 137/171 (80.12%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 L+ KE D+Q LA+ H+G+ N D+QM +YV+KR+ DG YIINL +TWEKL MAAR+IVAIENP D+ V S+RPYGQRAVLKF +T A IAGR+TPGTFTNQ+Q +F EPR+LI+TDPR+DHQP+ EA+ NIP IA C+TDSP+RYVDI IP NNK H IG ++W+L Sbjct: 8 LALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAARIIVAIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTPGTFTNQIQAAFREPRILIVTDPRSDHQPVTEASYVNIPVIALCNTDSPLRYVDIAIPCNNKSIHSIGLMWWML 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_DROWI (40S ribosomal protein SA OS=Drosophila willistoni GN=sta PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 8.445e-62 Identity = 115/171 (67.25%), Postives = 134/171 (78.36%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 LS KE DI ML A HLG++N +FQME+YV+KRR DG+ IINLGKTWEKL +AAR IVAIEN D+ V S+RP GQRAVLKFAKYT IAGR TPG FTNQ+Q +F EPRLL++TDP TDHQPI EA+ NIP IAF +TDSP+RY+DI IP NNK H IG ++WLL Sbjct: 8 LSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNIINLGKTWEKLVLAARAIVAIENASDVFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPMTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSPHSIGLMWWLL 178 The following BLAST results are available for this feature:
BLAST of CB611084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611084 ID=CB611084; Name=CB611084; organism=Citrus sinensis; type=EST; length=626bpback to top |