CB611084

Overview
NameCB611084
Unique NameCB611084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_MAGGR (40S ribosomal protein S0 OS=Magnaporthe grisea GN=RPS0 PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 7.905e-60
Identity = 106/177 (59.89%), Postives = 134/177 (75.71%), Query Frame = 3
Query:   96 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            A  P   +    DI+M+LAA+ H+G+KN    M  Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CDTDSP  YVD+ IP NNKG+H IGC++W+L
Sbjct:    4 ANLPSVFNATSQDIEMLLAAQSHIGSKNLQVHMAPYLWKTRQDGVNVINVGKTWEKIVLAARIITAIDNPADVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGCIWWML 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_ANOGA (40S ribosomal protein SA OS=Anopheles gambiae GN=AGAP011777 PE=3 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.032e-59
Identity = 107/171 (62.57%), Postives = 136/171 (79.53%), Query Frame = 3
Query:  114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            LS KE D+  MLAA  H+G+ + +FQME+YV+KRR DG++IINLG+T+EKL +AAR I +IE PG++   S+RPYGQRAVLK+A YT A  IAGR TPG FTNQ+QT+F EPRLLI+TDP TDHQP+ EA+  NIP IAFC+TDSP+++VDI IP N K  H IG ++W+L
Sbjct:    8 LSLKEDDVTKMLAATTHIGSTSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCIASIEYPGEVFAISSRPYGQRAVLKYAHYTQATPIAGRFTPGAFTNQIQTTFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPVKFVDIAIPCNTKSTHSIGLMWWML 178          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_AJECG (40S ribosomal protein S0 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.348e-59
Identity = 108/174 (62.07%), Postives = 133/174 (76.44%), Query Frame = 3
Query:  105 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            P   +    DI+M+LAA+ HLG+KN    ME Y++K R DGI +IN+GKTWEK+ +AAR+I A++NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H IG ++W+L
Sbjct:    7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAVDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_AEDAE (40S ribosomal protein SA OS=Aedes aegypti GN=AAEL008083 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.348e-59
Identity = 107/171 (62.57%), Postives = 134/171 (78.36%), Query Frame = 3
Query:  114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            L+ K+ D+  MLAA  H+G+ + +FQME YV+KRR DG++IINLG+TWEKL +AAR I +IE PG++   S+RPYGQRAVLKFA YT A   AGR TPG FTNQ+Q +F EPRLLI+TDP TDHQP+ EA+  NIP IAFC+TDSP+++VDI IP NNK  H IG ++WLL
Sbjct:    8 LALKDDDVTKMLAATTHVGSTSVNFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCIASIEYPGEVFAISSRPYGQRAVLKFAHYTEATPTAGRFTPGAFTNQIQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLL 178          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_ORNPR (40S ribosomal protein SA OS=Ornithodoros parkeri PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.300e-59
Identity = 104/171 (60.82%), Postives = 134/171 (78.36%), Query Frame = 3
Query:  114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            L  K+ D++  L A+ H+GT   DFQM++Y FKRR+DG+Y+I+L KTWEKL +AAR IVAIENP ++   S+RPYGQRAVLKFA +T A  IAGR TPGTFTNQ+Q +F EPRLL++ DPR DHQP+ EA+  NIP IAFC+TD+ +RYVD+ IP NNK +H IG ++W+L
Sbjct:    8 LGLKDDDVRRFLTAKTHIGTAQLDFQMQQYCFKRRSDGVYLIDLKKTWEKLLLAARAIVAIENPAEVCAISSRPYGQRAVLKFASFTGATPIAGRFTPGTFTNQIQAAFREPRLLVVCDPREDHQPVTEASYVNIPVIAFCNTDACLRYVDVAIPCNNKAQHSIGLMWWML 178          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFU (40S ribosomal protein S0 OS=Aspergillus fumigatus GN=rps0 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.004e-59
Identity = 112/179 (62.57%), Postives = 135/179 (75.42%), Query Frame = 3
Query:  102 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AIENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H IG ++WLL
Sbjct:    2 APSQLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIENPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLL 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_ASPFC (40S ribosomal protein S0 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=rps0 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.004e-59
Identity = 112/179 (62.57%), Postives = 135/179 (75.42%), Query Frame = 3
Query:  102 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            AP QL    +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AIENP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTD Q IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H IG ++WLL
Sbjct:    2 APSQLPPIFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIENPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWLL 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDS (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.004e-59
Identity = 106/165 (64.24%), Postives = 131/165 (79.39%), Query Frame = 3
Query:  132 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            DI+M+LAA+ HLG+KN    M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H IG ++W+L
Sbjct:   16 DIEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDR (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.004e-59
Identity = 106/165 (64.24%), Postives = 131/165 (79.39%), Query Frame = 3
Query:  132 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            DI+M+LAA+ HLG+KN    M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H IG ++W+L
Sbjct:   16 DIEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWML 180          
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_SUBDO (40S ribosomal protein SA OS=Suberites domuncula PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.692e-59
Identity = 107/171 (62.57%), Postives = 133/171 (77.78%), Query Frame = 3
Query:  114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626
            LS KE D+  +LAA  HLG  N D QM +YVFK + DG+ IIN+ KTWEKL +AARVI AIENP D+ V + +P+GQRA+LKFA YT A  IAGR TPGTFTNQ+Q +F EPRLLI++D R+DHQPI EAA  NIP IAFC+T+SP+RY+D+ IP NN GK+ +G ++WLL
Sbjct:    8 LSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLL 178          
The following BLAST results are available for this feature:
BLAST of CB611084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_MAGGR7.905e-6059.8940S ribosomal protein S0 OS=Magnaporthe grisea GN=... [more]
RSSA_ANOGA1.032e-5962.5740S ribosomal protein SA OS=Anopheles gambiae GN=A... [more]
RSSA_AJECG1.348e-5962.0740S ribosomal protein S0 OS=Ajellomyces capsulata ... [more]
RSSA_AEDAE1.348e-5962.5740S ribosomal protein SA OS=Aedes aegypti GN=AAEL0... [more]
RSSA_ORNPR2.300e-5960.8240S ribosomal protein SA OS=Ornithodoros parkeri P... [more]
RSSA_ASPFU3.004e-5962.5740S ribosomal protein S0 OS=Aspergillus fumigatus ... [more]
RSSA_ASPFC3.004e-5962.5740S ribosomal protein S0 OS=Aspergillus fumigatus ... [more]
RSSA_AJEDS3.004e-5964.2440S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_AJEDR3.004e-5964.2440S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_SUBDO6.692e-5962.5740S ribosomal protein SA OS=Suberites domuncula PE... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_B11 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611084 ID=CB611084; Name=CB611084; organism=Citrus sinensis; type=EST; length=626bp
GCGGGATCACAGCCAGCGAGCAGAAGTCTCCGATGGTACCACGAGTCTCA
GCTTTCTCTCGCAGGTTTTGAGAAATAAAGATGGCGACCGGAACAGCAAC
GGCCCCGAGGCAGCTCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAG
CCGCCGAAGTTCATTTGGGTACTAAGAACTGTGACTTCCAAATGGAACGT
TACGTGTTCAAGCGCCGAAACGATGGAATTTATATTATCAATCTTGGCAA
GACTTGGGAGAAGCTACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAA
ACCCTGGGGACATTATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCT
GTGTTGAAGTTTGCAAAGTACACTCACGCCCATGCCATTGCTGGCAGGCA
CACTCCTGGTACATTTACCAATCAAATGCAAACATCATTCAATGAGCCCC
GACTTCTCATTCTAACAGATCCACGAACAGACCATCAGCCAATTAAGGAA
GCTGCTCTTGGAAACATTCCCACCATTGCCTTTTGTGACACTGACTCACC
TATGCGTTATGTTGATATTGGCATTCCTGCCAATAACAAGGGCAAACACA
TCATTGGGTGTCTCTTCTGGCTTTTG
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