CB611084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_BOTFB (40S ribosomal protein S0 OS=Botryotinia fuckeliana (strain B05.10) GN=rps0 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 9.663e-58 Identity = 110/179 (61.45%), Postives = 133/179 (74.30%), Query Frame = 3 Query: 102 APRQL----SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 AP QL + DI+ +LAA+ HLG KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H IG ++W+L Sbjct: 2 APSQLPAIFNPTSQDIEQLLAAQCHLGAKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHSIGLVWWML 180
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_PLAYO (40S ribosomal protein SA OS=Plasmodium yoelii yoelii GN=PY06059 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.262e-57 Identity = 107/170 (62.94%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 117 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK I ++WLL Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLL 177
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_PLACH (40S ribosomal protein SA OS=Plasmodium chabaudi GN=PC000391.02.0 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.262e-57 Identity = 107/170 (62.94%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 117 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK I ++WLL Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLL 177
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_PLABA (40S ribosomal protein SA OS=Plasmodium berghei (strain Anka) GN=PB000415.00.0 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.262e-57 Identity = 107/170 (62.94%), Postives = 131/170 (77.06%), Query Frame = 3 Query: 117 SQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 S KE I ML +VH+GTKN + +M+RYV+ R DG++IINL KT+EKLQ+AARVIVA+ NP D++V SARP+G RAVLKFA+YT A AIAGR TPG TNQ+ F EPRLLI+TDPRTD Q +KE+A NIP IA CD+DSP+ +VDI IP NNKGK I ++WLL Sbjct: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARVIVAVSNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFIEPRLLIVTDPRTDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLL 177
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_PODAN (40S ribosomal protein S0 OS=Podospora anserina GN=RPS0 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.153e-57 Identity = 104/177 (58.76%), Postives = 132/177 (74.58%), Query Frame = 3 Query: 96 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 A P + DI+ +LAA+ H+G+KN + Y++K R DG+ IIN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+++TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+H IG ++W+L Sbjct: 4 ANLPSIFNATSQDIEQLLAAQCHIGSKNLGVHAQPYLWKTRADGVNIINIGKTWEKIVLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWML 180
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_NANOT (40S ribosomal protein S0 OS=Nannizzia otae (strain CBS 113480) GN=RPS0 PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.796e-57 Identity = 103/165 (62.42%), Postives = 129/165 (78.18%), Query Frame = 3 Query: 132 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 D++MML A+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+++TDPRTD Q IKEA+ NIP IA CD DSP +VD+ IP NNKG+H IG ++W+L Sbjct: 16 DMEMMLTAQCHLGSKNMQTHMEPYLWKTRPDGVNVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDADSPTEFVDVAIPTNNKGRHAIGLVWWML 180
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_USTMA (40S ribosomal protein S0 OS=Ustilago maydis GN=RPS0 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.263e-57 Identity = 101/174 (58.05%), Postives = 133/174 (76.44%), Query Frame = 3 Query: 105 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 P L+ E DI ++LAA+ H+GTKN D QM Y++KRR DGI+++N+GKTWEK+ AAR++ AIENP DI V S R YG RAVLKFA T A AIAGR TPG+FTN + SF EPR++++TDPR DHQ I+EA+ NIP I+F D+DSP+++VD+ IP N +G+H +G L+WLL Sbjct: 5 PAALNPTEEDISLLLAAQTHIGTKNADKQMAPYIYKRRADGIHLLNIGKTWEKIVFAARILAAIENPADICVISGRQYGHRAVLKFAAQTGATAIAGRFTPGSFTNYITRSFKEPRVIVVTDPRVDHQAIREASYVNIPCISFVDSDSPLKFVDVAIPGNVRGRHSVGLLWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA_MACHI (40S ribosomal protein SA OS=Maconellicoccus hirsutus PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.263e-57 Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 3 Query: 114 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 L E DI ML+A HLG +N +FQME+Y++KRR+DGI I NL KTWEKL +AAR I A+E+ +I V S+RP+GQRAVLKFA +T A IAGR TPG FTNQ+Q +F EPRLL++TDP D QPI EA+ NIP IAFC+TDSP+RYVDI IP N K H IG ++WLL Sbjct: 8 LKLTEGDITKMLSANTHLGAENTNFQMEQYIYKRRSDGINIFNLRKTWEKLLLAARAIAAVEHAAEIFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPAEDKQPITEASYVNIPVIAFCNTDSPLRYVDIAIPCNTKSAHSIGLMWWLL 178
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHJY (40S ribosomal protein S0-A OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0a PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.263e-57 Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 3 Query: 96 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 A P L+ + DI+ +LAA H+G+KN D +ME YV+KRR+DG++IIN+GKTWEK+ +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+I TDPR D Q IKEA+ NIP I+ CDTDSP+ +VD+ IP NNKG IG ++WLL Sbjct: 4 AGRPSILNATDDDIKQLLAASCHIGSKNLDVRMENYVWKRRSDGVHIINIGKTWEKIVLAARVIATIENPADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIATDPRADAQAIKEASYVNIPVISLCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLL 180
BLAST of CB611084 vs. ExPASy Swiss-Prot
Match: RSSA3_SCHJY (40S ribosomal protein S0-C OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0c PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.068e-56 Identity = 104/174 (59.77%), Postives = 130/174 (74.71%), Query Frame = 3 Query: 105 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHIIGCLFWLL 626 P L+ E DI+ +LAA H+G+KN + +ME YV+KRR DG+ IIN+GKTWEK+ +AAR+I +ENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + +F EPRL+I TDPR D Q IKEA+ NIP IA CDTDSP+ +VD+ IP NNKG IG ++WLL Sbjct: 8 PSVLNATEEDIKQLLAASCHIGSKNLEIRMENYVWKRRADGVNIINIGKTWEKIVLAARIIATVENPADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTFREPRLIIATDPRADAQAIKEASYVNIPVIALCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLL 181 The following BLAST results are available for this feature:
BLAST of CB611084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CB611084 ID=CB611084; Name=CB611084; organism=Citrus sinensis; type=EST; length=626bpback to top |