CB611093

Overview
NameCB611093
Unique NameCB611093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 3
Query:  276 LADQRVFDTFGGSTEHSPPLDEQQDEEGDQRGS-GDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEIIYKGAHNRPKP 590
            +A Q   D     +E +P + E       Q GS G+S          EDGYNWRKYGQK VKG+E+ RSYY+CTHPNC+ KK++ERS  G++ + +Y G H+ PKP
Sbjct:   66 VASQSEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIRE--KVMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQVVDTVYFGEHDHPKP 169          

HSP 2 Score: 83.1889 bits (204), Expect = 1.295e-15
Identity = 66/199 (33.17%), Postives = 94/199 (47.24%), Query Frame = 3
Query:   87 SFSLGTRNKQSSPSIEVSVQSENSPQNVNAAKVHSQYRNSL---SLQVQTDFSRAT------TEKDNGCNTILADQRVFDTFGGSTEHSPPLDEQQDEEGDQRGSGDSMVAGAGGASSE---DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-EGRLTEIIYKGAHNRPKPPPNRRSAIGSNPLDMQLD 644
            S+ +    K S  S++   Q+E         K+H     S+   +  V+TD S+++      T KD    T    ++     GG+ E SP           +R + DS +        +   DGY WRKYGQK VKGS YPRSYY+C+ P C VKK VERS  + +L    Y+G H+   PP   R    +N LD ++D
Sbjct:  208 SYDIMFVEKTSGSSVQTLRQTE-------PPKIHGGLHVSVIPPADDVKTDISQSSRITGDNTHKDYNSPTAKRRKK-----GGNIELSPV----------ERSTNDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPP--GRVVTHNNMLDSEVD 382          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.108e-18
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 3
Query:  417 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEIIYKGAHNRPKPPPNR 602
            DGYNW+KYGQK+VKGS++P SYYKCT+  C  K+KVERSL+G++ EI+YK  HN    PPN+
Sbjct:  469 DGYNWQKYGQKKVKGSKFPLSYYKCTYLGCPSKRKVERSLDGQVAEIVYKDRHNH--EPPNQ 528          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16
Identity = 65/198 (32.83%), Postives = 96/198 (48.48%), Query Frame = 3
Query:   66 KPVAESGSFSLGTR-NKQSSPSIEVSVQSENSPQNV----NAAKVHSQYRN---SLSLQVQTDFSRATTEKDN----GCNTILADQRVFDTFGGSTEHSPPLDEQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEI-IYKGAHNRPKPPPNRRSAIGS 620
            K ++  G+F LG   +  SS     S+  EN   N     ++ K H    +   ++  +V+   S +++E D+        I   + V D  G   + S  + + + +E  ++    S +        EDGY WRKYGQK VK S YPRSYY+CT   C VKK+VERS +     I  Y+  HN P  P NRR+A+ S
Sbjct:   56 KNLSPQGAFELGFELSPSSSDFFNPSLDQENGLYNAYNYNSSQKSHEVVGDGCATIKSEVRVSASPSSSEADHHPGEDSGKIRKKREVRDG-GEDDQRSQKVVKTKKKEEKKKEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHP-IPTNRRTAMFS 251          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 56/194 (28.87%), Postives = 86/194 (44.33%), Query Frame = 3
Query:   27 DNILEDINTSFAFKPVAESGSFS-----LGTRNKQSSPSIEVSVQSENSPQNVNAAKVHSQYRNSLSLQVQTDFSRATTEKDNGCNTILADQRVFDTFGGSTEHSPPLDEQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEG-RLTEIIYKGAHNRPKP 590
            ++ L+ +     F   + S SFS     L   N  +S   ++ +    S + VN            S  V +  + A  + ++G    + DQ   D         P L  ++  +   R +  + +  +   + +DGY WRKYGQK VK S YPRSYY+CT   C VKK+VERS +   +    Y+G H  P P
Sbjct:   92 NSFLDLLRQDHQFASSSNSSSFSFDAFPLPNNNNNTSFFTDLPLPQAESSEVVNTTPTSPN-----STSVSSSSNEAANDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFP 280          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.919e-15
Identity = 45/108 (41.67%), Postives = 54/108 (50.00%), Query Frame = 3
Query:  336 DEQQDEEGDQRGSGDS--MVAGAGGASS--------------------EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEG-RLTEIIYKGAHNRPKP 590
            D+ +D EGD  G G+S   +   G                        EDGY WRKYGQK VK S YPRSYY+CT   C VKK+VERS +   +    Y+G HN P P
Sbjct:   88 DQMEDNEGDLHGVGESSKQLTKQGKKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPSIVITTYEGKHNHPIP 195          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.919e-15
Identity = 39/67 (58.21%), Postives = 44/67 (65.67%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEI-IYKGAHNRPKPPPNRRSA 611
            EDGY WRKYGQK VK S YPRSYY+CT   C VKK+VERS +     I  Y+G HN P P   R S+
Sbjct:  172 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFQDPTVVITTYEGQHNHPIPTNLRGSS 238          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.919e-15
Identity = 37/70 (52.86%), Postives = 45/70 (64.29%), Query Frame = 3
Query:  417 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEG-RLTEIIYKGAHNRPKPPPNRRSAIGSN 623
            DGY WRKYGQK VKG+  PRSY+KCT+  C+VKK VER  +  +L    Y G HN P PP  R ++   N
Sbjct:  308 DGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHPSPPARRSNSSSRN 377          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.391e-15
Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  336 DEQQDEEGDQRGSGDSMVAGAGG--ASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEII-YKGAHNRPKPPPNRRSAIGSNPL 629
            + Q  +   + G  +  V  A G      DGY WRKYGQK VKG+ +PR+YY+CT   C V+K +E ++E     II YKG HN   P P +R    S+ L
Sbjct:  303 NSQSSDSVSKPGKKNKFVVHAAGDVGICGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVENTKAVIITYKGVHNHDMPVPKKRHGPPSSML 403          

HSP 2 Score: 68.1662 bits (165), Expect = 4.309e-11
Identity = 38/101 (37.62%), Postives = 48/101 (47.52%), Query Frame = 3
Query:  297 DTFGGSTEHSPPL---DEQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEGRLTEIIYKGAHNRPKP 590
            D    ST    PL     +Q++  D        V       + DGYNWRKYGQKQVK  +  RSYY+CT+  C  KK    +  G + EI+ KG H    P
Sbjct:  126 DPATASTAQDLPLVSVPTKQEQRSDSPVVNRLSVTPVPRTPARDGYNWRKYGQKQVKSPKGSRSYYRCTYTECCAKKIECSNDSGNVVEIVNKGLHTHEPP 226          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVER-SLEGRLTEIIYKGAHNRP 584
            +DGY WRKYGQK VK S YPRSYY+CT   C VKK+V+R S E  + E  Y+G HN P
Sbjct:   30 DDGYRWRKYGQKSVKNSLYPRSYYRCTQHMCNVKKQVQRLSKETSIVETTYEGIHNHP 87          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVER-SLEGRLTEIIYKGAHN 578
            +DGY WRKYGQK VK S +PRSYY+CTH NC+VKK+VER S + R+    Y+G HN
Sbjct:  145 DDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHN 200          
The following BLAST results are available for this feature:
BLAST of CB611093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
WRKY1_ARATH8.663e-2046.23WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK19_ARATH8.108e-1862.90Probable WRKY transcription factor 19 OS=Arabidops... [more]
WRKY8_ARATH5.811e-1632.83Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRK48_ARATH9.912e-1628.87Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK71_ARATH4.919e-1541.67Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRK28_ARATH4.919e-1558.21Probable WRKY transcription factor 28 OS=Arabidops... [more]
WRK10_ARATH4.919e-1552.86Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK32_ARATH8.391e-1540.59Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK43_ARATH5.439e-1460.34Probable WRKY transcription factor 43 OS=Arabidops... [more]
WRK12_ARATH5.439e-1462.50Probable WRKY transcription factor 12 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_C10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611093 ID=CB611093; Name=CB611093; organism=Citrus sinensis; type=EST; length=652bp
GGGCAGAGGCCCCTGATAAAAGCAAGGATAACATCTTGGAGGACATCAAT
ACATCATTTGCATTTAAGCCTGTTGCAGAATCAGGTTCTTTTTCCCTTGG
TACAAGAAATAAGCAGTCCTCTCCTAGTATTGAGGTTTCTGTTCAGTCTG
AGAATTCCCCCCAAAATGTAAATGCAGCCAAAGTCCATTCTCAATACAGA
AACAGCCTCAGCCTCCAAGTCCAAACAGACTTCTCCAGAGCAACAACTGA
AAAGGATAATGGGTGTAATACCATCTTGGCTGATCAAAGGGTCTTTGATA
CTTTTGGTGGCAGTACTGAACATTCTCCACCTCTTGATGAGCAACAGGAT
GAAGAAGGAGATCAAAGAGGCAGTGGAGATTCCATGGTTGCTGGTGCTGG
AGGTGCATCATCTGAAGATGGATATAATTGGAGAAAATATGGACAAAAAC
AGGTGAAGGGTAGTGAGTATCCGCGTAGTTATTACAAGTGCACACATCCA
AACTGTCAGGTTAAGAAGAAAGTGGAGAGATCTCTTGAAGGCCGATTAAC
TGAGATCATATACAAAGGAGCTCATAATCGCCCCAAGCCTCCACCCAATC
GCCGATCAGCCATTGGGTCTAACCCTCTTGACATGCAATTAGACATTCAT
GA
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