CB611093

Overview
NameCB611093
Unique NameCB611093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLEG-RLTEIIYKGAH 575
            +DGY WRKYGQK VK +++PRSYY+CT   C+VKK+VER  +  R+    Y+G H
Sbjct:  223 DDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITTYEGRH 277          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 3
Query:  339 EQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHP-NCQVKKKVERSLEGRLTEI-IYKGAHNRPKPP 593
            +Q   E   R +  S+ A +  A   DG  WRKYGQK  KG+  PR+YY+CT    C V+K+V+R  E R   I  Y+G HN P PP
Sbjct:  272 DQSAAEATMRKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPLPP 358          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 3
Query:  306 GGSTEHSPPLDEQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHP---NCQVKKKVERSLEGRLT-EIIYKGAH 575
            G S   +P    ++DE  +Q     ++  G      +D + WRKYGQK++ GS +PR+YY+CTH    NC  KK+V+R  +   T  + Y+G+H
Sbjct:  137 GASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSH 230          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11
Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 3
Query:  330 PLDEQQDEEGDQRGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCT-HPNCQVKKKVERSLEGRLTEI-IYKGAHNRPKPP 593
            P    Q  E   R +  S+ A +      DG  WRKYGQK  KG+  PR+YY+CT    C V+K+V+R  E R   I  Y+G HN P PP
Sbjct:  284 PTTFDQTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPP 373          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-EGRLTEIIYKGAHNRPKPPPN 599
            +DGY WRKYGQK VK + +PRSYYKCT   C+VKK+V+R   +  +    Y+G H      P+
Sbjct:   65 DDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPS 127          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 3
Query:  414 EDGYNWRKYGQKQVKGSEYPRSYYKCT-HPNCQVKKKVERSLEGRLTEI-IYKGAHNRPKP 590
            +DGY WRKYGQK  + +  PR+Y+KC   P+C VKKKV+RS+E +   +  Y+G HN P P
Sbjct:  146 KDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMP 206          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.300e-11
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 3
Query:  417 DGYNWRKYGQKQVKGSEYPRSYYKCTH-PNCQVKKKVERSLEGRLTEII-YKGAHNRPKPP 593
            D Y+WRKYGQK +KGS YPR YYKC+    C  +K VER LE     I+ Y+  HN PK P
Sbjct:  314 DDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHPKLP 374          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  405 ASSEDGYNWRKYGQKQVKGSEYPRSYYKCT-HPNCQVKKKVERSLEGRLTEI-IYKGAHNRPKP 590
            A+  DG  WRKYGQK  KG+  PR+YY+CT  P C V+K+V+R LE     I  Y+G HN P P
Sbjct:  232 ATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLP 295          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.351e-11
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 3
Query:  312 STEHSPPLDEQQDEEGDQ---RGSGDSMVAGAGGASSEDGYNWRKYGQKQVKGSEYPRSYYKCTHP-NCQVKKKVERSLEG-RLTEIIYKGAHNRPKPP 593
            ST H     E+Q    DQ   R +  S+ A +   +  DG  WRKYGQK  KG+  PR+YY+CT    C V+K+V+R  E   +    Y+G HN P PP
Sbjct:  207 STNH-----EEQQNPHDQLPYRKARVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPP 300          
BLAST of CB611093 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.601e-11
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 3
Query:  411 SEDGYNWRKYGQKQVKGSEYPRSYYKC-THPNCQVKKKVERS-LEGRLTEIIYKGAHNRPKPPPNRRSAIGS 620
            S D + WRKYGQK +KGS YPR+YY+C +   C  +K+VERS L+  +  + Y G H  P+ P +R S  GS
Sbjct:  164 SSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPR-PTHRNSLAGS 234          
The following BLAST results are available for this feature:
BLAST of CB611093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
WRK13_ARATH8.683e-1254.55Probable WRKY transcription factor 13 OS=Arabidops... [more]
WRK31_ARATH1.134e-1143.68Probable WRKY transcription factor 31 OS=Arabidops... [more]
WRK55_ARATH2.526e-1136.17WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRKY6_ARATH3.300e-1142.22WRKY transcription factor 6 OS=Arabidopsis thalian... [more]
WRK45_ARATH3.300e-1147.62Probable WRKY transcription factor 45 OS=Arabidops... [more]
WRK40_ARATH3.300e-1150.82Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRK21_ARATH3.300e-1154.10Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRKY9_ARATH5.628e-1151.56Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK47_ARATH7.351e-1140.40Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK27_ARATH9.601e-1147.22Probable WRKY transcription factor 27 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IVaF_C10 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611093 ID=CB611093; Name=CB611093; organism=Citrus sinensis; type=EST; length=652bp
GGGCAGAGGCCCCTGATAAAAGCAAGGATAACATCTTGGAGGACATCAAT
ACATCATTTGCATTTAAGCCTGTTGCAGAATCAGGTTCTTTTTCCCTTGG
TACAAGAAATAAGCAGTCCTCTCCTAGTATTGAGGTTTCTGTTCAGTCTG
AGAATTCCCCCCAAAATGTAAATGCAGCCAAAGTCCATTCTCAATACAGA
AACAGCCTCAGCCTCCAAGTCCAAACAGACTTCTCCAGAGCAACAACTGA
AAAGGATAATGGGTGTAATACCATCTTGGCTGATCAAAGGGTCTTTGATA
CTTTTGGTGGCAGTACTGAACATTCTCCACCTCTTGATGAGCAACAGGAT
GAAGAAGGAGATCAAAGAGGCAGTGGAGATTCCATGGTTGCTGGTGCTGG
AGGTGCATCATCTGAAGATGGATATAATTGGAGAAAATATGGACAAAAAC
AGGTGAAGGGTAGTGAGTATCCGCGTAGTTATTACAAGTGCACACATCCA
AACTGTCAGGTTAAGAAGAAAGTGGAGAGATCTCTTGAAGGCCGATTAAC
TGAGATCATATACAAAGGAGCTCATAATCGCCCCAAGCCTCCACCCAATC
GCCGATCAGCCATTGGGTCTAACCCTCTTGACATGCAATTAGACATTCAT
GA
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