CB611111

Overview
NameCB611111
Unique NameCB611111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.128e-13
Identity = 50/134 (37.31%), Postives = 66/134 (49.25%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTK--EKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G+S  CS    A+V     L    T     + SYI    DS     GE +I C  I ++P++ FTI    + + P  YIL++      +C SGF   D+    G LWILGDVF+  Y TVFD G  +IG A  A
Sbjct:  247 GESIACSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASEDS----SGEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQSNG----ICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLAPVA 372          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G S  C+    A+V     L    T    ++ I     +  N  G+  + C  I  +P++ FTI    + L    YIL++ EG    C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  262 GQSIACNGGCQAIVDTGTSLLSGPTN--AIANIQSKIGASQNSQGQMAVSCSSIKNLPDIVFTINGIQYPLPASAYILQSQEG----CSSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRANNQVGLAPVA 387          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.600e-13
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 3
Query:  345 IIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            ++ C+  PT+P++SF +G K + L+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD G  RIGFA A
Sbjct:  316 VVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRGNNRIGFALA 399          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + + P  YIL++       CISGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13
Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G++  C+    A+V     L    T    ++ I     +  N  G+ ++ C  I ++P++ FTI    + + P  YIL++ EG    CISGF   +LP   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQS-EGS---CISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  327 NPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 3
Query:  339 ESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 596
            E +++C+++PT+P++SF +G K + L+   Y+L+        C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYNNIS-CTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGFALA 399          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 49/136 (36.03%), Postives = 67/136 (49.26%), Query Frame = 3
Query:  195 VSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRG-PLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            +S+  S  CS    A+V     L      ++ +S + E   +  N  GE ++DCD   ++P  +F I    F LSP  YIL T       C+ G  A  L    G PLWILGDVF+  Y++VFD    R+GFA  A
Sbjct:  259 ISSEASGWCSQGCQAIVDTGTSLLT--VPQEYMSDLLEATGAQENEYGEFLVDCDSTESLPTFTFVINGVEFPLSPSAYILNTDGQ----CMVGVEATYLSSQDGEPLWILGDVFLRAYYSVFDMANNRVGFAALA 388          
BLAST of CB611111 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 3
Query:  204 GDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 599
            G++  C+    A+V     L    T    ++ I     +  N  GE ++ C  I ++P++ FTI    + + P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  263 GEAIACAEGCQAIVDTGTSLLTGPTSP--IANIQSDIGASENSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
The following BLAST results are available for this feature:
BLAST of CB611111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PEPA_BOVIN1.128e-1337.31Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPA_SORUN2.514e-1334.09Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
RENI_CALJA5.600e-1338.10Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
PEPA2_MACFU7.314e-1333.33Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_MACMU9.552e-1333.33Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA_HUMAN1.248e-1234.09Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA4_MACFU1.248e-1240.66Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
RENI_SHEEP2.779e-1237.21Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPC_RABIT2.779e-1236.03Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPA1_MACFU2.779e-1232.58Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0001_IIaF_H08 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IIaF_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB611111 ID=CB611111; Name=CB611111; organism=Citrus sinensis; type=EST; length=855bp
GGGATGCCATTGGTGGCGATGGAGTTGTTAGTGCAGAGTGTAAGCTAGTT
GTTTCCCACTACGGGGATTTAATATGGGATCTTTTAGTATCAGGGCTACT
ACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATGGCGCTG
AATATGTGAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAACGTATCA
GCCGGGGATAGTGCAGTGTGCAGTGCTTGTGAAATGGCCGTGGTTTGGGT
CCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCAGTTATA
TAAATGAGCTCTGCGACAGCCTGCCAAATCCGATGGGCGAATCAATTATT
GACTGTGATCGCATTCCAACCATGCCAAATGTTTCATTCACCATCGGAGA
CAAAATTTTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCGGAGAAG
GGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTGCCTCCT
CCAAGGGGTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTTTATCA
CACTGTTTTCGACTCTGGTAAGCTCCGGATCGGCTTTGCTGAGGCTGCGT
AATGATCTACTTACTGTCAAGTTTTTATGTAGTAGCAGCGATCATCACCT
GCTCATATGAGGAGGAGGGTTCTAGAATGTAGATTATGGTTTTCATGTAC
TGTAAAACGATCAGTATGCTTTTATGCATAACTATCTTCATCATCACCAC
AGATGATATGCTGATATATACTTATGTAAAATCCTATCATCCTATGTTTA
AAGTGATTTAATTTTATGATATTCTGACGGATAAAAGATAAAAAAAAAAA
AAAAA
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