CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 2.221e-21 Identity = 34/110 (30.91%), Postives = 62/110 (56.36%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 GG + D+ ++ G+ ++KD+ HP+M + IEN ++ +L CP E K +++ ++I+ E + + Q E++ M ++ V TLVI + G D A H L+ +R V Sbjct: 211 GGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRV 320 HSP 2 Score: 55.0694 bits (131), Expect = 2.221e-21 Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 IA TG IV R ++L +G GL + + G + ++++C +A TI +RGG+K ++ E R++ DA+ VARN++ + S+ G G Sbjct: 328 IARVTGATIVNRVEDLKESDVGTNCGLFKVEMIG--DEYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGG 417
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 4.890e-21 Identity = 33/96 (34.38%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS-RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E I +TG + + + +KLG A LV E S ++ ++++ N+ + V+I RG N + +EE +RS+HDALCV R L++ +++ G G Sbjct: 321 EVEFICKSTGCKPIADIESFAEDKLGHADLVEETS--SSGEKIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGG 414 HSP 2 Score: 60.4622 bits (145), Expect = 4.890e-21 Identity = 33/105 (31.43%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 K+GG ++DTELI G+ + + + P RIE A IA++ PPKP +++V ++ + + ++E++Y +M +K K GA +++ Q D N L +H Sbjct: 200 KLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDMENQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALH 304
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.353e-21 Identity = 34/108 (31.48%), Postives = 59/108 (54.63%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 GG + D ++ G+ +KD++H +M +RIEN +I +L P E K +++ V+I E + TL + E++Y ++M + +VI + G D A H N+ A R Sbjct: 221 GGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFR 328 HSP 2 Score: 54.299 bits (129), Expect = 6.353e-21 Identity = 30/92 (32.61%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLGKA-GLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +A ATG IV R E+ +G GL + G ++ + E C + +A TI +RGG+K ++ E +R++ DA+ V RN++ + ++ G G Sbjct: 338 VARATGATIVSRTDEIRESDIGTGCGLFEMRKIG--EEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGG 427
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.145e-19 Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A GG I L+ + LG+ L E G DR + C ++ TI +RGG + +EET+RS+HDA+ + R I+N+S+V G G Sbjct: 318 DLKRTMMACGGSIQTSVNALSDDVLGRCELFEEIQIGG--DRYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG 410 HSP 2 Score: 52.373 bits (124), Expect = 1.145e-19 Identity = 31/107 (28.97%), Postives = 51/107 (47.66%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 320 GG LED++L+ G+ K S+ PK+ ++ KIA+L E K +V ++TVE +Q + E D + K GA +V+ + D A R++ Sbjct: 202 GGALEDSQLVAGVAFKKTFSYAGFEMQPKKYQSPKIALLNVELELKAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHKSGAKVVLSKLPIGDVATQYFADRDM 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.146e-19 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + + TPE LG A L E S + +++ I CA+ + V+I +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 329 DIEFICKTIGTKPIAHIDHFTPEMLGTAELAEEVSLDGS-GKLVKITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 423 HSP 2 Score: 47.7506 bits (112), Expect = 1.146e-19 Identity = 22/90 (24.44%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +++ + R+E AKI ++ PPK +++ + + + ++E+ Y +MV++ K G ++ Q Sbjct: 210 KLGGTIDDCELVEGLVLTQRVANSSV-SRVEKAKIGLIQFCLSPPKTDMDNQIVVSDYTQMDRVLREERAYILNMVKQIKKAGCNVLFIQ 298
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.491e-19 Identity = 31/108 (28.70%), Postives = 57/108 (52.78%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 GG + D +I G+ ++KD++HP+M + I+N +I +L C E K ++ VDI + F L + E++Y + + + LV + G D A H + + + +R Sbjct: 205 GGDISDCRVIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGESDTMVDITNEDDFSALLKIEEEYVQRICEDIIKLKPDLVFTEKGVSDLAQHFFVKKGITCLR 312 HSP 2 Score: 53.1434 bits (126), Expect = 1.491e-19 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLGKA-GLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 IA +G IV R EL +G GL + G + ++E C +A TI +RG +K ++ E +R++ DAL VARN++ + +V G G Sbjct: 322 IARISGATIVSRTDELQESDIGTGCGLFEIRKIG--DEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGG 411
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 1.937e-19 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A GG I L P+ LG + E G +R + C ++ TI +RGG + +EET+RS+HDA+ + R I+N+S+V G G Sbjct: 318 DLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGG--ERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG 410 HSP 2 Score: 51.9878 bits (123), Expect = 1.937e-19 Identity = 29/107 (27.10%), Postives = 51/107 (47.66%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 320 GG LE+++L+ G+ K S+ PK+ +N KIA+L E K ++ + TVE +Q + E D ++K GA +++ + D A R++ Sbjct: 202 GGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDM 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 1.939e-19 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E ++ G + + + T ++LG A LV E S G+ R+ I + V++ IRG N M+I+ET+RS+HDALCV R L++ ++ G G Sbjct: 320 EIEFLSKGLGCKPIADIELFTEDRLGSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGG 415 HSP 2 Score: 53.5286 bits (127), Expect = 1.939e-19 Identity = 29/105 (27.62%), Postives = 55/105 (52.38%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 KVGG ++DTE+I G+ + + + P R E AKI ++ PPKP T++ + ++ + + ++E+ Y ++ +K K +++ Q D N L +H Sbjct: 199 KVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALH 303
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.939e-19 Identity = 31/96 (32.29%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E ++ + G + + + T ++LG A +V E +S G+ + ++ + V++ IRG N M+++ET+RS+HDALCV R L++ +++ G G Sbjct: 322 EVEFLSKSLGCKPISDVELFTEDRLGSADVVEEVESDGSNIVTITGVKTTNKNPTVSVVIRGANNMVLDETERSLHDALCVIRCLVKERALIAGGG 417 HSP 2 Score: 55.4546 bits (132), Expect = 1.939e-19 Identity = 28/105 (26.67%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 KVGG ++DTE++ G+ + ++ + P RIE A+I ++ PPKP T++ + ++ + + ++E+ Y ++ +K K +++ Q D N L +H Sbjct: 201 KVGGTIDDTEMVNGVVLTQNAVKTAGGPTRIEKARIGLIQFQISPPKPDTENNIVVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALH 305
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.521e-19 Identity = 34/108 (31.48%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 GG +E + ++ G+ ++KD++HP+M +RIEN +I +L CP E K +++ ++I + + + E++ M V LVI + G D A H L+ N+ A+R Sbjct: 204 GGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQHYLLKANITALR 311 HSP 2 Score: 49.2914 bits (116), Expect = 2.521e-19 Identity = 31/92 (33.70%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLGKA-GLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 IA A G IV R ++L + +G GL G + ++ C N +A TI +RG +K +I E +R++ DA+ VARN+ + + G G Sbjct: 321 IARACGANIVNRLEDLREKDVGTGCGLFYIDKLG--DEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGG 410 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |