CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV-----------GGCRIGADCHSHRWKNCSKVSGVDTRK 419 K GG L DT L+ GI +DK++ HP MP+R+ENA+IA+L P E KP+ ++ I + E+ + L +++++ + ++K GA +VI Q G DD A H L + + AVR V G RI D R ++ V+ RK Sbjct: 212 KHGGSLRDTRLVRGIVLDKEVVHPDMPRRVENARIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERK 361 HSP 2 Score: 82.4185 bits (202), Expect = 2.144e-15 Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E IA ATG RIV ++L PE LG A LV E+ G +D+M++IE N ++VTI +RGG + +++E +RS+HDAL V + I + IV G G Sbjct: 327 DIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVG--EDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGG 419
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.201e-19 Identity = 33/113 (29.20%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---GATLVICQWGFDDEANHLLMHRNLPAVRWV 338 GG LED+ ++ G+ +KD++HP+M + I+N ++ +L CP E K ++ +++ QQE +++ C D+ +VI + G D A H L+ +N+ +R V Sbjct: 209 GGTLEDSVVLDGVMFNKDITHPKMRRFIKNPRVILLDCPLEYKKGESMTNLEMMKETDMTDALQQE---MEELALMCNDILKHKPDVVITEKGVSDLAQHYLLKQNVSVIRRV 318 HSP 2 Score: 54.299 bits (129), Expect = 7.201e-19 Identity = 31/92 (33.70%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 361 IAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 I+ +G IV R +E+ +GK GL K G + ++ C N A +I +RG +K ++ E +R++HD L VA+N+ N +V G G Sbjct: 326 ISRVSGATIVNRPEEIQESDVGKKCGLFEVKLIG--DEYFTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGG 415
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 7.205e-19 Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A GG I L+ + LG+ + E G +R + C ++ T +RGG + +EET+RS+HDA+ + R I+N+S+V G G Sbjct: 318 DLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG 410 HSP 2 Score: 53.1434 bits (126), Expect = 7.205e-19 Identity = 31/107 (28.97%), Postives = 50/107 (46.73%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 320 GG LED++L+ G+ K S+ PK+ N KIA+L E K ++ + TVE +Q + E D ++K GA +V+ + D A R++ Sbjct: 202 GGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 63.5438 bits (153), Expect = 7.209e-19 Identity = 34/94 (36.17%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 LE + +A GG V F+ L+ E LG AGLV E + G +++ +IE C N +VT+ ++G NK + + K ++ D L +N I + +V G G Sbjct: 321 LERLTLACGGLAVNSFEGLSEECLGHAGLVFEYALG--EEKFTFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAG 412 HSP 2 Score: 50.8322 bits (120), Expect = 7.209e-19 Identity = 34/112 (30.36%), Postives = 54/112 (48.21%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVR 332 DT+LI G+ +D HP+M K++ +A I E K + TVE+ + L + E+K+ +D VQK D+ +VI Q G D + +L N+ A+R Sbjct: 203 DTQLIRGLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEVSSGFFYKTVEEKEKLVKAERKFIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALR 314
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 7.209e-19 Identity = 33/98 (33.67%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRA---VTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E ++ ATG + + T ++LG A +V E ++ R++ I+ + V+I RG N+++++ET+RSIHDALCV R L++ +++ G G Sbjct: 325 EIEFLSKATGCKPIADIDNFTEDRLGSADVVEE--IESSGSRIVKIDGVSAKNVKPTVSIVCRGANQLVLDETERSIHDALCVVRCLVKEKALIAGGG 420 HSP 2 Score: 52.7582 bits (125), Expect = 7.209e-19 Identity = 28/105 (26.67%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQM-PKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 KVGG +++TEL+ G+ + +++ P R++ AKIA++ PPKP ++ V ++ + + ++E+ Y ++ +K K +++ Q D N L +H Sbjct: 204 KVGGTIDETELVNGVVLTQNVVKTAGGPVRVDKAKIALIQFQLSPPKPDMENNVVVNDYRQMDKILKEERAYLLNICKKIKKSKCNVLLIQKSILRDAVNDLALH 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.369e-19 Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A GG I L+ + LG+ + E G +R + C ++ T +RGG + +EET+RS+HDA+ + R I+N+S+V G G Sbjct: 318 DLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG 410 HSP 2 Score: 52.7582 bits (125), Expect = 9.369e-19 Identity = 30/107 (28.04%), Postives = 50/107 (46.73%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 320 GG LED++L+ G+ K S+ PK+ N K+A+L E K ++ + TVE +Q + E D ++K GA +V+ + D A R++ Sbjct: 202 GGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 9.375e-19 Identity = 32/96 (33.33%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E ++ + G + + + T ++LG A LV E S GT ++ I+ V+ +RG N ++++ET+RS+HDALCV R L++ +++ G G Sbjct: 321 EIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKITGIKTGNAKPTVSCIVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGG 416 HSP 2 Score: 54.6842 bits (130), Expect = 9.375e-19 Identity = 28/105 (26.67%), Postives = 56/105 (53.33%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDM-SHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 KVGG ++DTE++ G+ + +++ P R+E AKI ++ PPKP T++ + ++ + + ++E+ Y + +K K +++ Q D N L +H Sbjct: 200 KVGGTIDDTEMVDGVVLTQNIVKSAGGPVRMEKAKIGLIQFQISPPKPDTENNIVVNDYRQMDKILKEERAYLLKICKKIKKAKCNVLLIQKSILRDAVNELALH 304
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.219e-18 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +E + +A GG + F +L+P++LG AGLV E + G +++ +IE C N R+VT+ I+G NK + + K ++ D L RN I + +V G G Sbjct: 321 MERLTLACGGVALNSFDDLSPDQLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAG 412 HSP 2 Score: 43.8986 bits (102), Expect = 1.219e-18 Identity = 33/112 (29.46%), Postives = 50/112 (44.64%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVR 332 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R Sbjct: 203 DTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALR 314
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.585e-18 Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + V + TP+ LG A L E S + ++ I C + + VTI +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 332 DIEFICKTIGTKPVAHIDQFTPDMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 426 HSP 2 Score: 43.5134 bits (101), Expect = 1.585e-18 Identity = 20/90 (22.22%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +++ + R+E AKI ++ PK +++ + + + ++E+ Y ++V++ K G +++ Q Sbjct: 213 KLGGTIDDCELVEGLVLTQKVANSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 301
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.585e-18 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + V + T + LG A L E + + ++L I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 332 DIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGS-GKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 426 HSP 2 Score: 44.669 bits (104), Expect = 1.585e-18 Identity = 21/90 (23.33%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +S+ + R+E AKI ++ PK +++ + + + ++E+ Y ++V++ K G +++ Q Sbjct: 213 KLGGTIDDCELVEGLVLTQKVSNSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 301 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |