CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 1.585e-18 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + V + T + LG A L E + + ++L I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 332 DIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGS-GKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 426 HSP 2 Score: 44.669 bits (104), Expect = 1.585e-18 Identity = 21/90 (23.33%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +S+ + R+E AKI ++ PK +++ + + + ++E+ Y ++V++ K G +++ Q Sbjct: 213 KLGGTIDDCELVEGLVLTQKVSNSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 301
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 2.680e-18 Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +E + +A GG + F +L P+ LG AGLV E + G +++ +IE C N R+VT+ ++G NK + + K +I D L +N I + +V G G Sbjct: 321 MERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAG 412 HSP 2 Score: 45.8246 bits (107), Expect = 2.680e-18 Identity = 34/112 (30.36%), Postives = 50/112 (44.64%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVR 332 DT LI G+ +D HP M KR+ENA I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R Sbjct: 203 DTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALR 314
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.680e-18 Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +E + +A GG + ++LTP+ LG AGLV E + G +++ +IE C N R+VT+ IRG NK + + K ++ D L +N I + ++ G G Sbjct: 320 MERLTLACGGTAMNSVEDLTPDCLGHAGLVYEYTLG--EEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAG 411 HSP 2 Score: 43.8986 bits (102), Expect = 2.680e-18 Identity = 32/112 (28.57%), Postives = 49/112 (43.75%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVR 332 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V K D+ +VI Q G D + L + A+R Sbjct: 202 DTTLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVSAGFFYKSAEEREKLVKAERKFIEDRVSKIIDLKRRVCGDSDKGFIVINQKGIDPFSLDALAKEGIVALR 313
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.680e-18 Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 E+E ++ + G + + + T ++LG A LV E S GT + ++ V++ IRG N M+++ET+RS+HDALCV R L++ ++ G G Sbjct: 321 EIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGG 416 HSP 2 Score: 50.447 bits (119), Expect = 2.680e-18 Identity = 31/108 (28.70%), Postives = 53/108 (49.07%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGI----TVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 KVGG + DTE++ G+ TV K P M E AKI ++ PPKP T++ + + + + ++E+ Y ++ +K K +++ Q D N L +H Sbjct: 200 KVGGTIGDTEMVDGVVLTQTVVKTAGGPTMK---EKAKIGLIQFQISPPKPDTENNIVVSDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALH 304
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 3.482e-18 Identity = 32/95 (33.68%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A GG I L+ + LG+ + E G +R + C ++ TI +RGG + +EET+RS+HDA+ + R I+N+S+V G G Sbjct: 318 DLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGG 410 HSP 2 Score: 49.2914 bits (116), Expect = 3.482e-18 Identity = 29/107 (27.10%), Postives = 49/107 (45.79%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNL 320 GG LE+++L+ G+ K S+ PK+ N IA+L E K ++ + TVE +Q + E D ++K GA +V+ + D A R++ Sbjct: 202 GGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM 308
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K G ++D+ L+ G+ +DK+ HP MPK++ENAKIA+L CP E + + ++ I + Q +QE++ DMV D GA ++ CQ G DD A H L + AVR V Sbjct: 198 KEGAAVDDSTLVQGVIIDKERVHPGMPKKVENAKIALLNCPIEVKETEVDAEIRITDPSQMQAFIEQEEQMIRDMVNSIVDTGANVLFCQKGIDDLAQHYLAKAGVLAVRRV 309 HSP 2 Score: 73.559 bits (179), Expect = 9.961e-13 Identity = 38/110 (34.55%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 322 LLSAGLVGV------ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 L AG++ V ++E ++ ATG IV ++L+PE LG+AG+V EK + + M+++E C +AVTI +RG + ++ E +R+I DA+ V + + +V G G Sbjct: 298 LAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGEAGVVSEKKI--SGEEMIFVEECKEPKAVTILVRGSTEHVVSEVERAIEDAIGVVAATVEDGKVVAGGG 405
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 4.528e-18 Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + V + T + LG A L E S + +++ I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 335 DIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGS-GKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 429 HSP 2 Score: 43.1282 bits (100), Expect = 4.528e-18 Identity = 20/90 (22.22%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +++ + R+E AKI ++ PK +++ + + + ++E+ Y ++V++ K G +++ Q Sbjct: 216 KLGGTIDDCELVEGLVLTQKVANSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 304
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 7.657e-18 Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +E + +A GG + F +L+P+ LG AGLV E + G +++ +IE C N R+VT+ I+G NK + + K ++ D L +N I + +V G G Sbjct: 321 MERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAG 412 HSP 2 Score: 43.8986 bits (102), Expect = 7.657e-18 Identity = 33/112 (29.46%), Postives = 50/112 (44.64%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVR 332 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R Sbjct: 203 DTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALR 314
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 1.294e-17 Identity = 36/96 (37.50%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I G + V + T + LG A L E S + ++ I C + + VTI +RG NK++IEE +RSIHDALCV R L++ +++ G G Sbjct: 332 DIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGG 426 HSP 2 Score: 43.5134 bits (101), Expect = 1.294e-17 Identity = 20/90 (22.22%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQ 272 K+GG ++D EL+ G+ + + +++ + R+E AKI ++ PK +++ + + + ++E+ Y ++V++ K G +++ Q Sbjct: 213 KLGGTIDDCELVEGLVLTQKVANSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQ 301
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 GG +E+TEL+ GI +DK++ HP MPKR+ENAKI +L E + + K+ I EK Q +QE+ +MV K + GA +V CQ G DD A + L + AVR V Sbjct: 207 GGSIEETELVDGIVLDKEVVHPGMPKRVENAKILLLDSALEVKETEIDAKIRITDPEKLQKFIEQEEAMLKEMVDKIVNAGANVVFCQKGIDDLAQYYLAKAGVLAVRRV 316 HSP 2 Score: 70.0922 bits (170), Expect = 1.101e-11 Identity = 36/110 (32.73%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 322 LLSAGLVGV------ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 L AG++ V ++E +A ATG +++ ++++ E LG+A LV E+ G ++M+++ C N +AVTI +RGG + ++EE R I DA+ + + +V G G Sbjct: 305 LAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGEAALVEERKVG--DEKMVFVTGCKNPKAVTILVRGGTEHVVEEIARGIEDAVRAVACAVEDGKVVVGAG 412 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |