CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.123e-17 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++E I+ +TG + V + T +KLG LV E +S G+ R E S V+I +RG N ++I+ET+RS+HDALCV R+L R ++V G G Sbjct: 323 DIEFISRSTGAKPVADIEAFTEDKLGSCDLVEEVESSGSKTVRFSSRE---GSNTVSILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGG 415 HSP 2 Score: 41.2022 bits (95), Expect = 8.123e-17 Identity = 23/104 (22.12%), Postives = 51/104 (49.04%), Query Frame = 3 Query: 6 VGGRLEDTELIYGITVDK-DMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWG-FDDEANHLLMH 311 +GG +EDT L G+ ++ + + P R+E AKI ++ PKP ++ + ++ + + ++E++Y + + K +++ Q D + L +H Sbjct: 203 LGGTIEDTTLANGLVLNNYAVKNAGGPSRMEKAKIGLIQFQLSAPKPDMENHIVVNDYRQMDKILKEERQYILGLAKAIKKSKCNVLLIQKSILRDAVSELALH 306
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 2.316e-16 Identity = 29/99 (29.29%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQ----DRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ IA A+G I+ L E+ +A ++ + + D ++ I++ + +I +RG N M +E +RS+HDALCV + ++ + S+V G G Sbjct: 315 DLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 413 HSP 2 Score: 52.7582 bits (125), Expect = 2.316e-16 Identity = 37/113 (32.74%), Postives = 54/113 (47.79%), Query Frame = 3 Query: 3 KVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GR + +++LI G ++ + MPKRI NAKIA L + K K +V I EK +RQ+E + +QK GA +++ G DD + AVR V Sbjct: 199 KAHGRSQMESKLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.912e-16 Identity = 35/110 (31.82%), Postives = 54/110 (49.09%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 + G ++EL+ G +DKD H MP + + A + +L P E + V I++ ++ Q QE+ V + D GA +V CQ G DD A H L + + AVR Sbjct: 208 QTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNEPVEVEETDIDTNVSIESPDQLQKFLDQEEAQLKQKVDQIVDSGADVVFCQKGIDDLAQHYLAKQGILAVR 317 HSP 2 Score: 38.891 bits (89), Expect = 3.912e-16 Identity = 21/96 (21.88%), Postives = 46/96 (47.92%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS-RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++ + TG +V + LG+A + R+++ + Y+E + VT+ +RG +++E +R + DAL V + + + ++ G G Sbjct: 323 DIRFLKNITGAAVVSDLDSIEAAVLGRASVRRDEA-----GELFYVEGIGDDVHGVTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGG 413
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA_HUMAN (T-complex protein 1 subunit alpha OS=Homo sapiens GN=TCP1 PE=1 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 5.085e-16 Identity = 29/99 (29.29%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQ----DRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ IA A+G I+ L E+ +A ++ + + D ++ I++ + +I +RG N M +E +RS+HDALCV + ++ + S+V G G Sbjct: 315 DLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 413 HSP 2 Score: 51.6026 bits (122), Expect = 5.085e-16 Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 3 Query: 3 KVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GR + ++ LI G ++ + MPKRI NAKIA L + K K +V I EK +RQ+E + +QK GA +++ G DD + AVR V Sbjct: 199 KAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 6.608e-16 Identity = 31/101 (30.69%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEK------LGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ +A A+G I+ L E+ LG+A V ++ D ++ I++ + +I +RG N M +E +RS+HDALCV + ++ + S+V G G Sbjct: 315 DLKCVAKASGATILSTLANLEGEETFEVTMLGQAEEVVQERI--CDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 413 HSP 2 Score: 51.6026 bits (122), Expect = 6.608e-16 Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 3 Query: 3 KVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GR + ++ LI G ++ + MPKRI NAKIA L + K K +V I EK +RQ+E + +QK GA +++ G DD + AVR V Sbjct: 199 KAHGRSQIESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 8.588e-16 Identity = 27/99 (27.27%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQ----DRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ IA A+G ++ L E+ +A ++ + + D ++ I++ + ++ +RG N M +E +RS+HDALCV + ++ + S+V G G Sbjct: 315 DLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 413 HSP 2 Score: 51.6026 bits (122), Expect = 8.588e-16 Identity = 37/113 (32.74%), Postives = 53/113 (46.90%), Query Frame = 3 Query: 3 KVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GR + ++ LI G ++ + MPKRI NAKIA L + K K +V I EK +RQ+E + +QK GA +++ G DD + AVR V Sbjct: 199 KAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA_CRIGR (T-complex protein 1 subunit alpha OS=Cricetulus griseus GN=TCP1 PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.450e-15 Identity = 32/101 (31.68%), Postives = 55/101 (54.46%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEK------LGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 +L+ IA A+G I+ L E+ LG+A V ++ D ++ I++ + +I +RG N M +E +RS+HDALCV + ++ + S+V G G Sbjct: 315 DLKRIAKASGASILSTLANLEGEETFEATMLGQAEEVVQERI--CDDELILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGG 413 HSP 2 Score: 50.447 bits (119), Expect = 1.450e-15 Identity = 36/113 (31.86%), Postives = 53/113 (46.90%), Query Frame = 3 Query: 3 KVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 K GR + ++ LI G ++ + MPKRI NAKIA L + K K +V I EK +RQ+E + ++K GA +++ G DD + AVR V Sbjct: 199 KAHGRSQVESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIEKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRV 311
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPZ_CAEEL (T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.886e-15 Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 352 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYG 627 +E + +A GG V +LTPE LG AGLV E S G +++ +IE C ++VT+ I+G NK I + K +IHD L N I + +++ G Sbjct: 325 MERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLG--EEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVDKAVLPG 414 HSP 2 Score: 36.1946 bits (82), Expect = 1.886e-15 Identity = 27/116 (23.28%), Postives = 48/116 (41.38%), Query Frame = 3 Query: 24 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV-------------GATLVICQWGFDDEANHLLMHRNLPAVR 332 DT L+ G+ +D HP MP+ +++A I E K + + T ++ + L E+++ V K ++ +VI Q G D + LL + A+R Sbjct: 203 DTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGILALR 318
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.451e-15 Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELT------PEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++ +A ATG +V F ++ P LG A V E+ D ++ I+ S AV++ +RG N M++E +R++HDALC+ + + +N++V G G Sbjct: 318 DMRHVAKATGATLVTTFADMEGEETFDPAHLGSADEVVEERIA--DDDVILIKGTKTSSAVSLILRGANDYMLDEMERALHDALCIVKRTLESNTVVAGGG 416 HSP 2 Score: 43.1282 bits (100), Expect = 2.451e-15 Identity = 28/110 (25.45%), Postives = 50/110 (45.45%), Query Frame = 3 Query: 9 GGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWV 338 G D+ L+ G ++ + MP R+ AKIA L + K + +V ++ + + +RQ+E + ++K GA +++ G DD A + AVR V Sbjct: 205 GQSARDSYLLNGYALNTGRAAQGMPLRVSPAKIACLDFNLQKTKMQLGVQVVVNDPRELEKIRQREADMTKERIEKLLKAGANVILTTKGIDDMALKYFVEAGAIAVRRV 314
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.453e-15 Identity = 31/109 (28.44%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 6 VGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVR 332 +GG L ++E++ G+ ++KD+ HPQM + IEN +I I+ P E K +++ + F + E++ +M ++ V +V+C+ G D A +L N+ +R Sbjct: 200 LGGNLMESEVVDGVLINKDIIHPQMRRVIENPRIVIIESPLEYKKGESQTNYEFSKENDFTRALEIEEEQVREMCERIIGVRPDIVVCEKGISDLALSILFENNITGLR 308 HSP 2 Score: 38.1206 bits (87), Expect = 2.453e-15 Identity = 24/96 (25.00%), Postives = 49/96 (51.04%), Query Frame = 1 Query: 349 ELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 ++ ++ G R V R ++L +G GL +G ++ CA+ +A ++ IRG K +++E +R+ DA+ VA+++ + + G G Sbjct: 314 DISRLSKVCGARSVSRPEDLEERHVGVSCGLFEYIKYG--EEYYCKFSRCAHPKACSVVIRGPTKDILDELERNFMDAVKVAKSIFISPKLCPGGG 407 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |