CF417077
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.814e-61 Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWKAPRNLCS 431 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRI+DVG KK+ VDEFPFCVHLVSWEKENVSSEALEA RIACNKYM K+AGKD FHLRVRVHPFHVLR NKMLSCAGADRLQTGM G F K P+ C+ Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGAKKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGK-PQGTCA 127 HSP 2 Score: 142.895 bits (359), Expect = 1.595e-33 Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWCECXAFSGCHGPLAQRPPGRAFLE 702 RGAFGKPQGTCARVAIGQVLLSVR +D++S+HAQEALRRAKFKFPGR+KIIV+RKWGFTK++RADYL+ + + P GC GPL+ R PG+AFL+ Sbjct: 116 RGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVN-PKLLGCRGPLSNRKPGQAFLK 217
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.979e-60 Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRP RCYR + K YPKSRF RGVPD KI+I+D+G +K GV EFP V+ +S E+EN+S+EALEAARI NKYM K+AGKD FHLR+RV+PFHVLRINKMLSCAGADRLQTGM G F K Sbjct: 1 MGRRPGRCYRYLSKKAYPKSRFNRGVPDSKIQIFDLGRRKAGVLEFPLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGK 121 HSP 2 Score: 71.2478 bits (173), Expect = 1.979e-60 Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFT 570 RG+FGKP G ARV Q +LS+R K+S A EALRRAK KFPG QKI VS K+GFT Sbjct: 116 RGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFT 174
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50 Identity = 93/121 (76.86%), Postives = 102/121 (84.30%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPARCYR IKNKPYPKSRFCRGVPD KIRI+D+G K+ VD FP CVH++S E+E++SSEALEAARI NKYM K GKD FHLRVR HPFHV RINKMLSCAGADRLQTGM G + K Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGK 121 HSP 2 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 51/86 (59.30%), Postives = 62/86 (72.09%), Query Frame = 1 Query: 343 LTRCFRVLGLIGS-RLE--WRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADY 591 +TR ++L G+ RL+ RGA+GKPQG ARV IG +L S+R K+ N HA EA RRAKFKFPGRQ I+ SRKWGFTK+ R DY Sbjct: 96 VTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDY 181
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.969e-48 Identity = 95/128 (74.22%), Postives = 101/128 (78.91%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWKAPRNLCS 431 M RRPARCYR KNKPYPKSR+ R VPD KIRIYD+G KK VDEFP CVHLVS E E +SSEALEAARI NKYM +G+DAFHLRVRVHPFHVLRINKMLSCAGADRLQ GM G W P L + Sbjct: 1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGA-WGKPHGLAA 127 HSP 2 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEV-EVGE 612 RGA+GKP G ARV IGQ++ SVR KDSN E LRRA++KFPG+QKII+S+KWGFT R +YL+ E GE Sbjct: 116 RGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGE 189
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.552e-47 Identity = 87/121 (71.90%), Postives = 97/121 (80.17%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 MGRRPA+CYR KNK YPKSR+CRGVP+ KIRIYD GM+K D FP HL+S E+E + SEALEAARI NKYM K AGK+A+H+RVRVHPFHV RINKMLSCAGADRLQ GM G F K Sbjct: 1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGK 121 HSP 2 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 325 PSMFCALTRCFRVLGLIGSRLEWRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLE 597 P C + + G + RGAFGKP G ARV IGQ L+S+R K + AL+RA +KF GRQ I S WGFT+ +Y++ Sbjct: 93 PFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVK 183
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.650e-36 Identity = 76/103 (73.79%), Postives = 81/103 (78.64%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLEVEVGEQDCPXWCECXAFSGCHGPLAQRPPGRAFLE 702 RGAFGKPQG CARVAIGQVLLSVRCKD N++HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR DYL+ + + P GCHG LA R PGRAFLE Sbjct: 45 RGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENRIVPDGVNAKLL-GCHGRLAARQPGRAFLE 146 HSP 2 Score: 87.4261 bits (215), Expect = 7.887e-17 Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = 3 Query: 261 CNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWKAPRNLCS 431 C A AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGM G F K P+ +C+ Sbjct: 1 CGGCEAGSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGK-PQGVCA 56
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.038e-33 Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPAR YR+ K Y + + +GVPDPKI+ +D+G +F V LV+ E+ V+ ALEAAR+A N+Y+ K G+ +HL++RV+P HVLR N + + AGADR+Q GM F K Sbjct: 1 MVNRPARIYREWKGPAYTRREYIKGVPDPKIQQFDMG---NPAGDFDVEVSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGK 118 HSP 2 Score: 53.5286 bits (127), Expect = 8.038e-33 Identity = 29/54 (53.70%), Postives = 35/54 (64.81%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSR 555 R AFGKP GT ARV GQ +++VR N HA+EALRRA KFP I+V + Sbjct: 113 RLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.711e-30 Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPARCY PY + + GVP PKI +++G ++ ++++ LV E + ALEAARIA NKY+A G F+ R+RV+P HV+R NKM++ AGADRLQ GM F K Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREM-MEKWEIKGELVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGK 120 HSP 2 Score: 47.3654 bits (111), Expect = 7.711e-30 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIV 549 R AFGKP GT ARV G V+L V + + + +EALRR KFP +I++ Sbjct: 115 RQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.371e-29 Identity = 51/121 (42.15%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M RPARCY PY + + GVP PKI +++G ++ + LV E + ALEAAR+ NKY++ G + L++RV+P HVLR NKM++ AGADRLQ GM F K Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIPGVPQPKIVKFEMGNVH---GDYDYRAELVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGK 118 HSP 2 Score: 49.6766 bits (117), Expect = 6.371e-29 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKII 546 R AFGKP GT ARV G +++ VR + + HA+EALRRA K P +I+ Sbjct: 113 RQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLPLPARIV 163
BLAST of CF417077 vs. ExPASy Swiss-Prot
Match: RL10_HYPBU (50S ribosomal protein L10e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl10e PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.100e-28 Identity = 51/126 (40.48%), Postives = 75/126 (59.52%), Query Frame = 3 Query: 48 MGRRPARCYRQIKNK-----PYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMEGCFWK 410 M ++PARCY + ++K PY + + GVP PKI+ + +G ++ + V + E+ + ALEAAR+A +KY++ G + RVRV+P HVLR NKM++ AGADRLQ GM F K Sbjct: 1 MPQKPARCYTKRRSKAFSGPPYTRKEYIHGVPPPKIQKFVMGNPH---GDYDYIVEVYVTERGQIRHNALEAARVAVHKYLSTTIGDQNYFFRVRVYPHHVLRENKMMAFAGADRLQEGMRQAFGK 123 HSP 2 Score: 50.8322 bits (120), Expect = 3.100e-28 Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 1 Query: 394 RGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRR--AKFKFPGRQKII 546 R AFGKP GT ARV GQ +L VR K + HA+EALRR +K P R ++I Sbjct: 118 RQAFGKPVGTAARVYPGQAVLEVRVKKEHLDHAKEALRRGASKLPLPSRIRVI 170 The following BLAST results are available for this feature:
BLAST of CF417077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417077 ID=CF417077; Name=CF417077; organism=Citrus sinensis; type=EST; length=703bpback to top |