CF417078 | Citrus Genome Database

Overview


Name	CF417078
Unique Name	CF417078
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	708

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9291	contig	Csv1_Contig9291:516..1219.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.168e-64
Identity = 138/232 (59.48%), Postives = 159/232 (68.53%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF             D S  E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIA P      GP+ +    +    + E    T  V     ++   C++    + +            +GL     FGFGPGLTV+
Sbjct:  160 KRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDADISAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHP-----GGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVATTGEGLEWGVLFGFGPGLTVE 386

HSP 2 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 49/87 (56.32%), Postives = 52/87 (59.77%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILD VE           ATR VLSEYGNMSSACVLFILDEMR+KSVE+  AT                    +TVVLHSVP
Sbjct:  309 HPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVAT-TGEGLEWGVLFGFGPGLTVETVVLHSVP 394

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.815e-64
Identity = 132/226 (58.41%), Postives = 157/226 (69.47%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            RFM+YQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIA P          +  G  + E    + SV     ++   C++    + +     +      +GL     FGFGPGLTV+
Sbjct:  157 RFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLG-LKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVE 381

HSP 2 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           A+R VL+EYGNMSSACVLFILDEMR++S E  +AT                    +T+VL SVP
Sbjct:  304 HPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQAT-TGEGLEWGVLFGFGPGLTVETIVLRSVP 389

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.815e-64
Identity = 141/234 (60.26%), Postives = 161/234 (68.80%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VE+PL+QLV T+QTILPDS+GAIDGHL EVGLTFHLLKDVPGLISKNIEK+L EAF PLGISD+NSIFWIA P      GP+        +   P++ EA  H  S      ++   C++      ++    +      +GL     FGFGPGLTV+
Sbjct:  155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLGEVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHP-----GGPAILDQVEAKLGLKPEKMEATRHVLSEYG---NMSSACVLFILDQMRKKSIENGLGTTGEGLDWGVLFGFGPGLTVE 379

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.151e-63
Identity = 136/233 (58.37%), Postives = 159/233 (68.24%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF            PD  VERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSIFW+A P      GP       + V    +R  A  H  S      ++   C++    + ++           +G      FGFGPGLTV+
Sbjct:  160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHP-----GGPAILDQVEAKVGLKKERMRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384

HSP 2 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 49/87 (56.32%), Postives = 54/87 (62.07%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLSEYGNMSSACVLFILDEMRK+S E+ +AT                    +TVVLHSVP
Sbjct:  307 HPGGPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT-TGEGFDWGVLFGFGPGLTVETVVLHSVP 392

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.151e-63
Identity = 136/233 (58.37%), Postives = 159/233 (68.24%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF            PD  VERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSIFW+A P      GP       + V    +R  A  H  S      ++   C++    + ++           +G      FGFGPGLTV+
Sbjct:  160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHP-----GGPAILDQVEAKVGLEKERMRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384

HSP 2 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 49/87 (56.32%), Postives = 54/87 (62.07%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLSEYGNMSSACVLFILDEMRK+S E+ +AT                    +TVVLHSVP
Sbjct:  307 HPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT-TGEGFDWGVLFGFGPGLTVETVVLHSVP 392

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.151e-63
Identity = 136/233 (58.37%), Postives = 158/233 (67.81%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD  VERPL+QLVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI ++L +AF PLGISDWNSIFW+A P      GP       + V     R  A  H  S      ++   C++    + ++           +GL     FGFGPGLTV+
Sbjct:  160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVVVGADPDDRVERPLFQLVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHP-----GGPAILDQVEAKVGLDKARMRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVE 384

HSP 2 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 49/87 (56.32%), Postives = 54/87 (62.07%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLSEYGNMSSACVLFILDEMRK+S E+ +AT                    +TVVLHSVP
Sbjct:  307 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT-TGEGLDWGVLFGFGPGLTVETVVLHSVP 392

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.427e-63
Identity = 99/148 (66.89%), Postives = 116/148 (78.38%), Query Frame = 1

Query:    1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIA 444
            KR+MMY QGCFAGGTVLRLAKDLAENNK ARVL+VCSE TAVTFRGP +T +DSLVGQALF            P   VE P++++VST Q ++P+S GAI G LREVGLTF+L K VP +IS+NI  +LS+AF PLGISD+NSIFWIA
Sbjct:  155 KRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTAVTFRGPNETDMDSLVGQALFADGAAAIIIGSDPVPEVENPIFEIVSTDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINGALSKAFDPLGISDYNSIFWIA 302

HSP 2 Score: 65.4698 bits (158), Expect = 1.427e-63
Identity = 35/58 (60.34%), Postives = 37/58 (63.79%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKAT 619
            H GG AILDQVE           ATR VLS YGNMSSACV FI+D MRKKS+E    T
Sbjct:  303 HLGGRAILDQVEQKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLETGLKT 360

HSP 3 Score: 23.8682 bits (50), Expect = 1.427e-63
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3

Query:  621 TGEGLXWGVL 650
            TGEGL WGVL
Sbjct:  361 TGEGLDWGVL 370

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.504e-63
Identity = 136/233 (58.37%), Postives = 159/233 (68.24%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF            PD  VERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSIFW+A P      GP       + V    +R  A  H  S      ++   C++    + ++           +G      FGFGPGLTV+
Sbjct:  160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHP-----GGPAILDQVEAKVGLEKERLRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384

HSP 2 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 49/87 (56.32%), Postives = 54/87 (62.07%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLSEYGNMSSACVLFILDEMRK+S E+ +AT                    +TVVLHSVP
Sbjct:  307 HPGGPAILDQVEAKVGLEKERLRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT-TGEGFDWGVLFGFGPGLTVETVVLHSVP 392

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.504e-63
Identity = 136/233 (58.37%), Postives = 159/233 (68.24%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF            PD  VERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF PLGI+D+NSIFW+A P      GP       + V    +R  A  H  S      ++   C++    + ++           +G      FGFGPGLTV+
Sbjct:  160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHP-----GGPAILDQVEAKVGLEKERMRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGRATTGEGFEWGVLFGFGPGLTVE 384

HSP 2 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 49/87 (56.32%), Postives = 54/87 (62.07%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE+          ATR VLSEYGNMSSACVLFILDEMRK+S E+ +AT                    +TVVLHSVP
Sbjct:  307 HPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGRAT-TGEGFEWGVLFGFGPGLTVETVVLHSVP 392

[Close]

BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.964e-63
Identity = 131/226 (57.96%), Postives = 157/226 (69.47%), Query Frame = 1

Query:    4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681
            RFM+YQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQALF            PD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF PLG+ DWNSIFWIA P          +  G  + E    + +V     ++   C++    + +     +      +GL     FGFGPGLTV+
Sbjct:  157 RFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLG-LKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVE 381

HSP 2 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 2

Query:  446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706
            HPGGPAILDQVE           A+R VL+EYGNMSSACVLFILDEMR++S E  +AT                    +T+VL SVP
Sbjct:  304 HPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQAT-TGEGLEWGVLFGFGPGLTVETIVLRSVP 389

The following BLAST results are available for this feature:

BLAST of CF417078 vs. ExPASy Swiss-Prot

BLAST of CF417078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146


Match Name	E-value	Identity	Description
CHS1_SINAL	5.168e-64	59.48	Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S...	[more]
CHS4_BROFI	8.815e-64	58.41	Chalcone synthase 4 OS=Bromheadia finlaysoniana GN...	[more]
CHS3_SOYBN	8.815e-64	60.26	Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV...	[more]
CHS6_SORBI	1.151e-63	58.37	Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=...	[more]
CHS5_SORBI	1.151e-63	58.37	Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=...	[more]
CHS2_MAIZE	1.151e-63	58.37	Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1	[more]
THS1_ARAHY	1.427e-63	66.89	Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1	[more]
CHS3_SORBI	1.504e-63	58.37	Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=...	[more]
CHS2_SORBI	1.504e-63	58.37	Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=...	[more]
CHS8_BROFI	1.964e-63	57.96	Chalcone synthase 8 OS=Bromheadia finlaysoniana GN...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_115000-008 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_A11 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417078 ID=CF417078; Name=CF417078; organism=Citrus sinensis; type=EST; length=708bp
AAGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCT
TCGCCTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTG
TTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGGCCCTGCCGATACT
CATCTTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGC
TGTGATCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTCGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGT
CCCCGGCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCTGAAGCGTTCG
CCCCGCTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCCACCC
CGGTGGGCCCGCAATTCTGGACCAAGTGGAGTCTAAACTGGGCCTCAAAG
GGGAGAAGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTAACATG
TCAAGCGCTTGTGTCTTGTTCATCCTTGACGAGATGAGAAAGAAGTCTGT
TGAGGAAGCGAAAGCCACCCACCGGCGAAGGGCTTGNNTGGGGTGTGCTG
NTTCGGGTTCGGGCCGGGGCTCACCGTCCAAGACCGTTGTGCTGCACAGT
GTCCCCAT