CF417078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.273e-62 Identity = 134/233 (57.51%), Postives = 158/233 (67.81%), Query Frame = 1 Query: 4 RFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGP-------SGV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 R MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF PD VERPL+QLVS SQ ILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L EAF PLGI+D+NSIFW+A P GP + V +R A H S ++ C++ + ++ +G FGFGPGLTV+ Sbjct: 160 RLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQRILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEEAFKPLGITDYNSIFWVAHP-----GGPAILDQVEAKVGLEKERMRATRHVLS---EYGNMSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVE 384 HSP 2 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 48/87 (55.17%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSVP 706 HPGGPAILDQVE+ ATR VLSEYGNMSSACVLFILDEMRK+S E+ + T +TVVLHSVP Sbjct: 307 HPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQTT-TGEGFDWGVLFGFGPGLTVETVVLHSVP 392
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 1.658e-62 Identity = 96/147 (65.31%), Postives = 110/147 (74.83%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWI 441 KR MMYQ GC+ GGTVLRLAKDLAENNKGAR LVVCSEITA+TF P+DT LD LVGQALF P+ VE+PL++LVS +QT++PD I G +VGLTFHL KDVP L+S+NIEKSL E F PLGI DWNSIFW+ Sbjct: 155 KRLMMYQLGCYGGGTVLRLAKDLAENNKGARALVVCSEITAITFHAPSDTDLDVLVGQALFGDGAASVIIGSDPNLEVEKPLFELVSAAQTLVPDCGHKIYGKTSDVGLTFHLHKDVPRLVSQNIEKSLVEVFQPLGIFDWNSIFWV 301 HSP 2 Score: 66.6254 bits (161), Expect = 1.658e-62 Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703 H GG ILDQVE TR V+SEYGNM+SACVLF+LDEMRK S +E T+ +T+VLHSV Sbjct: 303 HAGGREILDQVELKLGLKPEKLNVTRHVMSEYGNMASACVLFVLDEMRKTSTKEGFGTN-VEGLEWGVLCSFGPGLTIETIVLHSV 387
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.171e-62 Identity = 138/232 (59.48%), Postives = 161/232 (69.40%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLV-HP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF P +E+PL++LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI K+LSEAF PL ISD+NSIFWIA P GP+ + Q + E T V ++ C+ H EK V G ++ K L FGFGPGL+++ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALSEAFDPLNISDYNSIFWIAHP-----GGPAILDQVAQKLGLKPEKMKATRDVLSDYGNMSSACVTFHLDEIEKSVENGLKT--TGKDLEWGVLFGFGPGLSLE 379
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.171e-62 Identity = 137/234 (58.55%), Postives = 160/234 (68.38%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPS-------GV*TGPQRGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENN GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF P E+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+K+L EAF PLGI D+NSIFWIA P GP+ + P++ EA H S ++ C++ ++ + +GL FGFGPGLTV+ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNTGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP-LPAEKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKALVEAFQPLGIDDYNSIFWIAHP-----GGPAILDQVEAKLGLKPEKMEATRHVLSEYG---NMSSACVLFILDQMRKKSIENGLGTTGEGLEWGVLFGFGPGLTVE 379
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 2.171e-62 Identity = 130/231 (56.28%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSIFWIA P GP+ + Q + E T V ++ C++ + ++ +GL FGFGPGLT++ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHP-----GGPAILDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSTQDGLKTTGEGLEWGVLFGFGPGLTIE 380
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.171e-62 Identity = 130/231 (56.28%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF PLGISD+NSIFWIA P GP+ + Q + E T V ++ C++ + ++ + +GL FGFGPGLT++ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHP-----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIE 380
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.824e-62 Identity = 113/150 (75.33%), Postives = 129/150 (86.00%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPP 450 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF PLGISD+NSIFWIA P Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHP 304 HSP 2 Score: 24.6386 bits (52), Expect = 2.824e-62 Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2 Query: 446 HPGGPAILD 472 HPGGPAILD Sbjct: 303 HPGGPAILD 311
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.836e-62 Identity = 134/231 (58.01%), Postives = 157/231 (67.97%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF P +E+PL++LV T+QTI PDSDGAIDGHLREVGLTFHLLKDVPG++SKNI K+L EAF PL ISD+NSIFWIA P GP+ + Q + E T V ++ C++ + + +GL FGFGPGLT++ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHP-----GGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSGACVLFILDEMRRKSAEKGLKTTGEGLEWGVLFGFGPGLTIE 380 HSP 2 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 45/86 (52.33%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 446 HPGGPAILDQVESXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATHRRRAXXXXXXXXXXXXXXXKTVVLHSV 703 HPGGPAILDQVE ATR VLS+YGNMS ACVLFILDEMR+KS E+ T +TVVLHSV Sbjct: 303 HPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSGACVLFILDEMRRKSAEKGLKT-TGEGLEWGVLFGFGPGLTIETVVLHSV 387
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.703e-62 Identity = 130/231 (56.28%), Postives = 158/231 (68.40%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF PLGISD+NSIFWIA P GP+ + Q + E T V ++ C++ + ++ +GL FGFGPGLT++ Sbjct: 31 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHP-----GGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIE 256
BLAST of CF417078 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.703e-62 Identity = 130/231 (56.28%), Postives = 158/231 (68.40%), Query Frame = 1 Query: 1 KRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAPPRWARNSGPSGV*TGPQ----RGEAEGHTSSVE*VR*HVKRLCLVHP*RDEKEVC*GSESHPPAKGLXGVCXFGFGPGLTVQ 681 KR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF PLGISD+NSIFWIA P GP+ + Q + E T V ++ C++ + ++ +GL FGFGPGLT++ Sbjct: 155 KRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHP-----GGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIE 380 The following BLAST results are available for this feature:
BLAST of CF417078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417078 ID=CF417078; Name=CF417078; organism=Citrus sinensis; type=EST; length=708bpback to top |