CF417082
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_LOLBL (Cytochrome c oxidase subunit 3 OS=Loligo bleekeri GN=COIII PE=3 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 1.240e-11 Identity = 41/156 (26.28%), Postives = 51/156 (32.69%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE TFQG HT PN +IG PPL+I SG++VT AH + N + + F F+ FFV TGFHG+HVIIG+ F
Sbjct: 58 DIIRESTFQGYHTMKVSLGMRMGMVLFITSEICFFFAFFWAYFHSSLAPNTDIGASWPPLHINPLNPFQIPLLNTAILLASGVTVTWAHHSLMGGNHAEATQSMVLTVILGGY-FTLLQAEEYMEAPFSIADSVYGATFFVATGFHGLHVIIGSVF 212 HSP 2 Score: 39.2762 bits (90), Expect = 1.240e-11 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L R+ I HFS HH G E + YWHFV
Sbjct: 212 FLLICLFRMLIHHFSTNHHFGFEAAAWYWHFV 243
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_METSE (Cytochrome c oxidase subunit 3 OS=Metridium senile GN=COIII PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 2.090e-11 Identity = 42/156 (26.92%), Postives = 49/156 (31.41%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
D+ RE TFQG HT PN E+G + PP I SG +VT AH + + F M FA FFV TGFHG+HVIIGTTF
Sbjct: 61 DVIREATFQGLHTMVVKQGLKYGMLLFILSEVLFFFSFFWAFFHSSIAPNIELGAVWPPQGINPLNPFSVPLLNTAVLLSSGATVTWAHHALISGKKTEAIN-GLTITVVLGLIFTGLQAMEYYEAPFAISDSVYGSTFFVATGFHGMHVIIGTTF 215 HSP 2 Score: 37.3502 bits (85), Expect = 2.090e-11 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L RL F+R HHLG E + YWHFV
Sbjct: 215 FLAVCLARLVYHQFTRHHHLGFEAASWYWHFV 246
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_HYLLA (Cytochrome c oxidase subunit 3 OS=Hylobates lar GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 2.090e-11 Identity = 39/156 (25.00%), Postives = 50/156 (32.05%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
D+ RE T+QG+HT P ++G PP I SG+S+T AH + NN Q + F F FFV TGFHG+HVIIG+TF
Sbjct: 60 DVVREGTYQGHHTMPVQKGLRYGMVLFITSEIFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGIY-FTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 41.5874 bits (96), Expect = 2.090e-11 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FLT L+R + HF+ KHH G E + YWHFV
Sbjct: 214 FLTICLIRQLLFHFTSKHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_TACAC (Cytochrome c oxidase subunit 3 OS=Tachyglossus aculeatus aculeatus GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 2.713e-11 Identity = 42/156 (26.92%), Postives = 51/156 (32.69%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE T+QG+HTK P E+G PP I SG+S+T +H + N Q + F M F FFV TGFHG+HVIIGTTF
Sbjct: 60 DIVREGTYQGHHTKVVQKGLRYGMVLFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVSITWSHHSLMEGNRKQMIQALMITIALGLY-FTALQAMEYYESSFTISDGVYGSTFFVATGFHGLHVIIGTTF 214 HSP 2 Score: 38.1206 bits (87), Expect = 2.713e-11 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L+R + HF+ HH G E + YWHFV
Sbjct: 214 FLITCLLRQLLYHFTSNHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ONCNE (Cytochrome c oxidase subunit 3 OS=Oncorhynchus nerka GN=mt-co3 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 3.522e-11 Identity = 44/156 (28.21%), Postives = 52/156 (33.33%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE TFQG+HT P E+G PP I + SG++VT AH I QT + F F M F FFV TGFHG+HVIIG+TF
Sbjct: 60 DIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTIQALTLTILLGFY-FTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 36.5798 bits (83), Expect = 3.522e-11 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L+R HF+ +HH G E + YWHFV
Sbjct: 214 FLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ONCMY (Cytochrome c oxidase subunit 3 OS=Oncorhynchus mykiss GN=mt-co3 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 3.522e-11 Identity = 44/156 (28.21%), Postives = 52/156 (33.33%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE TFQG+HT P E+G PP I + SG++VT AH I QT + F F M F FFV TGFHG+HVIIG+TF
Sbjct: 60 DIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPAGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTIQALTLTILLGFY-FTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 36.5798 bits (83), Expect = 3.522e-11 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L+R HF+ +HH G E + YWHFV
Sbjct: 214 FLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ONCMA (Cytochrome c oxidase subunit 3 OS=Oncorhynchus masou GN=mt-co3 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 3.522e-11 Identity = 44/156 (28.21%), Postives = 52/156 (33.33%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE TFQG+HT P E+G PP I + SG++VT AH I QT + F F M F FFV TGFHG+HVIIG+TF
Sbjct: 60 DIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTIQALTLTILLGFY-FTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 36.5798 bits (83), Expect = 3.522e-11 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L+R HF+ +HH G E + YWHFV
Sbjct: 214 FLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ONCCL (Cytochrome c oxidase subunit 3 OS=Oncorhynchus clarki GN=mt-co3 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 3.522e-11 Identity = 44/156 (28.21%), Postives = 52/156 (33.33%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
DI RE TFQG+HT P E+G PP I + SG++VT AH I QT + F F M F FFV TGFHG+HVIIG+TF
Sbjct: 60 DIIREGTFQGHHTPPVQKGLRYGMILFITSEVFFFLGFFWAFYHASLAPTPELGGCWPPTGITTLDPFEVPLLNTAVLLASGVTVTWAHHSIMEGERKQTIQALTLTILLGFY-FTFLQGMEYYEAPFTIADGVYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 36.5798 bits (83), Expect = 3.522e-11 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FL L+R HF+ +HH G E + YWHFV
Sbjct: 214 FLAVCLLRQVQYHFTSEHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_PANPA (Cytochrome c oxidase subunit 3 OS=Pan paniscus GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 45.8246 bits (107), Expect = 3.522e-11 Identity = 39/156 (25.00%), Postives = 50/156 (32.05%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588
D+ RE T+QG+HT P ++G PP I SG+S+T AH + NN Q + F F FFV TGFHG+HVIIG+TF
Sbjct: 60 DVMRESTYQGHHTPPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGGHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLY-FTLLQASEYFESPFTISDGIYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 41.2022 bits (95), Expect = 3.522e-11 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 2
Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
FLT L+R + HF+ KHH G E + YWHFV
Sbjct: 214 FLTICLIRQLMFHFTSKHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ASTPE (Cytochrome c oxidase subunit 3 OS=Asterina pectinifera GN=COIII PE=3 SV=2) HSP 1 Score: 47.7506 bits (112), Expect = 4.572e-11 Identity = 43/162 (26.54%), Postives = 56/162 (34.57%), Query Frame = 1
Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFT------EERFFVTTGFHGIHVIIGTTF 588
D+ RE TFQG+HT P E+G+ PP I SG++VT AH +SI T R F + + ++ FT FFV TGFHG+HV+IGTTF
Sbjct: 59 DVIREATFQGSHTLPVNTGLRYGMILFITSEVCFFFAFFWAFFHSSLAPTVELGVSWPPTGISPINPFLVPLLNTAVLLSSGVTVTWAH------HSILTQNRTEAIQGLFLTVILGIYFTGLQAWEYY-DSPFTIADSVYGSSFFVATGFHGLHVLIGTTF 213 HSP 2 Score: 38.891 bits (89), Expect = 4.572e-11 Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 2
Query: 569 LLLELHFLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682
+L+ FL +RL HFS HH G E + YWHFV
Sbjct: 207 VLIGTTFLFICFLRLITFHFSNNHHFGFEAAAWYWHFV 244 The following BLAST results are available for this feature:
BLAST of CF417082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417082 ID=CF417082; Name=CF417082; organism=Citrus sinensis; type=EST; length=682bpback to top |